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Name : HPSA_07580 (HPSA_07580) Accession : YP_005772070.1 Strain : Helicobacter pylori SouthAfrica7 Genome accession: NC_017361 Putative virulence/resistance : Unknown Product : IS606 transposase Function : - COG functional category : - COG ID : - EC number : - Position : 1534441 - 1535769 bp Length : 1329 bp Strand : + Note : COG0675 Transposase and inactivated derivatives DNA sequence : ATGAAAGTCAATAAGGGTTTTAAATTCCGCTTGTATCCTACTAAAGAACAACAAGATAAATTGCAACACTCTTTTTTTGT CTATAACCAAGCCTATAACATTGGCTTGAATTTGCAACAAGAGCAATACGAGAAAAACAAAAATTTACCACCTAAAGAAA GAAAATACAAAAAATCAAGCGAATTAGACAATGCGATCAAACAATGCCTAAGAGCTAGGGATTTACCCTTTAGCGCTGTG ATAGCCCAACAATCACGCATGAATGTTGAAAGGGCTTTTAAAGACGCTTTAAAAATTAAAGATAGGGGTTTTCCTAAATT CAAAAACTCTAAATTCGCTAAACAATCTTTTTCGTGGAGTAATCAAGGCTTCTCTATCAAAGAGAGTGATGATGAGCGCT TCAAGGTATTCACTCTGATGAAAATGCCTTTAATGATGCGCATGCACAGAGACTTCCCCCCTAACGCTAAAATCAAGCAA ATTACAATCTCTTGCAGACACAGAAAATATTTCGTTAGCTTTAGCGTGGAATATAAACAAGACATTACTGCCATCAAAAA CCCTAAAGATTGTGTGGGGCTAGATTTGAATGTTCTTGATATAGCGTGTTCTTGTGGCGTGAATAACCCTGAAAAACTCA CTGATTTTAAGCGCTATATTCAAGACATGAAAGAATTGCTAGGATTAGAAATAGATGAAAAAACGGATCCAAAACGACTT ATCCCCACTTGTTCCAAATTGTATTCTTTAAAAAAATACTCTGAAAAATTTAAAAGACTGCAAAGAAAACAGAGCCGTAG GGTTTTAAAATCCAAACAAAACAAAACCAAATTAGGAGGTAATTTTTACAAAACGCAAAAGAAATTAAACCAAGCCTTTG AAAGGTCTAGTCATCAAAAAACAGACCGATACCATAAAATCACAAGCGAACTTTCAAAGCAATTTGAATGGATAGCAGTT GAAGACTTGCAAGTAAAGAACATGATTAAAAGAGCCAAACTCAAAAATGCTAAACAAAAGAGTGGGCTTAATAAATCTAT TCTCAACGCTTCATTCTATCAAATCATCTTCTTTTTAGACTACAAACAACAGCATAATGGCAAATTGTTAGTGAAAGTTC CCCCACAATACACTAGCAAAACTTGCTGTAATTGTGGGAGCATCAACCCCAAGCTTAAACTAAATCACAGGCAATATTGG TGTTCTGATTGTGGGTATAAAGAACACAGGGACATCAACGCTGCGAACAATATTTTAAGCAAAGGGTTAAGTCTTTTTGG GGTAGGAAATATCCATGCAGACTTTAAAGAACAAAGCCTTTCGTGTTAG Protein sequence : MKVNKGFKFRLYPTKEQQDKLQHSFFVYNQAYNIGLNLQQEQYEKNKNLPPKERKYKKSSELDNAIKQCLRARDLPFSAV IAQQSRMNVERAFKDALKIKDRGFPKFKNSKFAKQSFSWSNQGFSIKESDDERFKVFTLMKMPLMMRMHRDFPPNAKIKQ ITISCRHRKYFVSFSVEYKQDITAIKNPKDCVGLDLNVLDIACSCGVNNPEKLTDFKRYIQDMKELLGLEIDEKTDPKRL IPTCSKLYSLKKYSEKFKRLQRKQSRRVLKSKQNKTKLGGNFYKTQKKLNQAFERSSHQKTDRYHKITSELSKQFEWIAV EDLQVKNMIKRAKLKNAKQKSGLNKSILNASFYQIIFFLDYKQQHNGKLLVKVPPQYTSKTCCNCGSINPKLKLNHRQYW CSDCGYKEHRDINAANNILSKGLSLFGVGNIHADFKEQSLSC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpB | AAR03857.1 | transposase B-like protein | Not tested | cag PAI | Protein | 1e-176 | 88 |
| tnpA | CAJ31329.1 | insertion sequence IS606 transposase homolog A | Not tested | cag PAI | Protein | 1e-173 | 87 |
