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Name : HPSA_00545 (HPSA_00545) Accession : YP_005770740.1 Strain : Helicobacter pylori SouthAfrica7 Genome accession: NC_017361 Putative virulence/resistance : Resistance Product : cystathionine gamma-synthase Function : - COG functional category : - COG ID : - EC number : 2.5.1.48 Position : 110107 - 111249 bp Length : 1143 bp Strand : - Note : COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases DNA sequence : ATGCGCATGCAAACCAAATTGATCCATGGAGGCATTAGTGAGGACGCCACAACGGGGGCAGTGAGCGTGCCTATTTATCA AACTTCCACCTACCGCCAAGACGCCATAGGCCGCCCAAAAGGCTATGAATACTCTCGCTCAGGCAACCCCACGCGCTTTG CATTAGAAGAGCTTATTGCTGATTTAGAAGGGGGGGTTAAGGGGTTTGCTTTTGCCTCTGGTTTAGCCGGGATTCACGCT GTCTTTTCGCTCTTGCAATCAGGCGATCATGTGCTATTGGGCGATGATGTCTATGGGGGGACTTTCCGCTTGTTTGACAA GGTGCTTTCTAAAAACGGGCTTTCTTGCACCATTATAGACACTAGCGATATTTCTCAAATACAAAAGGCTATCAAGCCCA ACACCAAAGCCCTTTATTTGGAATCCCCTAGTAACCCTTTGCTTAAAATCACGGATTTGAAGCAATGCGCGAGTGTTGCT AAAACGCATGGCCTGCTCACTATCGTGGACAACACCTTTGCCACGCCTTATTGCCAAAATCCGCTTCTTTTGGGAGCGGA TATTGTAGTGCATAGCGGCACAAAATATTTAGGCGGGCATAGCGATGTGGTCGCCGGGCTTGTAACCACGAATAATGAAG CATTAGCCCAAGAGATCGCTTTTTTCCAAAACGCTATTGGGGGGGTGCTAGGCCCTCAAGACAGCTGGCTGTTGCAAAGA GGGATTAAAACGCTAGCATTGCGCATGGAAGCCCATCAAAAAAACGCCTTTTGTGTGGCTGAGTTTTTAGAAAAACACCC TAAAGTGGAAAAGGTTTATTACCCGGGCTTGCCCACTCACCCTAATCACGATCTAGCCAAAGCTCAGATGCACGGTTTTA GCGGAATGCTTTCTTTCACTCTCAAAAACGACAACGAAGCGACTCTTTTTGTAGAAAGCCTTAAATTATTCATTTTAGGC GAGAGTTTGGGCGGGGTGGAAAGTTTGGTGGGTATTCCAGCGTTTATGACCCATGCGTGTATCCCTAAAGTGCAACGAGA AGCCGCAGGGATTAGAGATGGCTTGGTGCGCTTGTCTGTGGGGATTGAGCATGAAAAGGATTTGTTAGAAGATTTAGAGC AAGCGTTCGCTAAAATAAGCTAA Protein sequence : MRMQTKLIHGGISEDATTGAVSVPIYQTSTYRQDAIGRPKGYEYSRSGNPTRFALEELIADLEGGVKGFAFASGLAGIHA VFSLLQSGDHVLLGDDVYGGTFRLFDKVLSKNGLSCTIIDTSDISQIQKAIKPNTKALYLESPSNPLLKITDLKQCASVA KTHGLLTIVDNTFATPYCQNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQR GIKTLALRMEAHQKNAFCVAEFLEKHPKVEKVYYPGLPTHPNHDLAKAQMHGFSGMLSFTLKNDNEATLFVESLKLFILG ESLGGVESLVGIPAFMTHACIPKVQREAAGIRDGLVRLSVGIEHEKDLLEDLEQAFAKIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAR0460 | YP_039909.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 7e-101 | 54 |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 4e-102 | 54 |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 6e-74 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPSA_00545 | YP_005770740.1 | cystathionine gamma-synthase | BAC0207 | Protein | 7e-64 | 43 |
