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Name : scoA (HMPREF4655_20911) Accession : YP_005770008.1 Strain : Helicobacter pylori 35A Genome accession: NC_017360 Putative virulence/resistance : Unknown Product : 3-oxoacid CoA-transferase Function : - COG functional category : - COG ID : - EC number : 2.8.3.5 Position : 881177 - 881875 bp Length : 699 bp Strand : - Note : COG: COG1788; Pfam: PF01144; InterPro: IPR012792 DNA sequence : ATGAACAAGGTTATAACCAATTTAGACAAAGCATTGAGCGGGTTAAAAGACGGGGACACTATTTTAGTGGGCGGTTTTGG GCTGTGTGGGATACCCGAATACGCCATTGATTACATTTATAAGAAAGGCATCAAGGATTTGATTGTCGTGAGCAATAACT GTGGCGTTGATGACTTTGGGCTTGGCATTCTGTTAGAAAAAAAGCAGATTAAAAAGATTATCGCTTCCTATGTGGGGGAG AATAAGATTTTTGAATCGCAAATGCTGAACGGAGAAATTGAAGTTGTTTTGACACCGCAAGGCACGCTGGCTGAAAACTT GCGCGCTGGAGGGGCTGGGATACCCGCTTACTACACCCCAACCGGAGTTGGGACTTTGATCGCTCAAGGCAAGGAATCAA GGGAATTTAACGGCAAAGAGTATATTTTAGAAAGAGCGATCACAGGCGATTACGGGCTTATCAAAGCCTATAAAAGCGAT ACTCTTGGGAACTTGGTGTTTAGAAAAACGGCTAGAAACTTCAATCCCTTGTGCGCGATGGCGGCAAAAATATGTGTCGC TGAAGTGGAAGAAATTGTCCCGGCCGGGGAATTAGACCCAGATGAAATACACTTGCCAGGAATTTATGTGCAACACATCT ATAAGGGCGAGAAATTTGAAAAACGGATAGAAAAAATCACGACAAGGAGTGCGAAATGA Protein sequence : MNKVITNLDKALSGLKDGDTILVGGFGLCGIPEYAIDYIYKKGIKDLIVVSNNCGVDDFGLGILLEKKQIKKIIASYVGE NKIFESQMLNGEIEVVLTPQGTLAENLRAGGAGIPAYYTPTGVGTLIAQGKESREFNGKEYILERAITGDYGLIKAYKSD TLGNLVFRKTARNFNPLCAMAAKICVAEVEEIVPAGELDPDEIHLPGIYVQHIYKGEKFEKRIEKITTRSAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18070.1 | unknown | Not tested | TTSS locus | Protein | 7e-27 | 44 |
