|
Name : HMPREF4655_20842 (HMPREF4655_20842) Accession : YP_005769946.1 Strain : Helicobacter pylori 35A Genome accession: NC_017360 Putative virulence/resistance : Unknown Product : Na+/H+ antiporter family protein Function : - COG functional category : - COG ID : - EC number : - Position : 814440 - 815753 bp Length : 1314 bp Strand : - Note : COG: COG2056; Pfam: PF03553; InterPro: IPR004770 DNA sequence : ATGCTAGAAAATAGCTCTATATGGAGCAATCCTGCCTTTGTGGCTATCATTTGCATGTCCGTTCTTAGCCTTTTAAGGCT CAATGTCATGCTTTCTATGATTAGCGCCACTCTCATAGCAGGATTTATGGGAGGGCTTGGGATCACGGAGAGTTTTAATG CAATGATAGATGGCATGAAAGGCAATTTAAACATCGCTTTAAGCTACATCCTTTTAGGGGCTTTAGCGGTAGCGATCGCT AAAAGCAATCTCATTAAAGTCGCTTTGAGTAAATTAATAGGCTTAATGAATTACAAGCGATCCACTTTTTGCTTTTTGAT CGCTTTCATCGCATGCTTTTCGCAAAATTTAGTGCCGGTGCATATCGCTTTTATCCCTATTTTAATCCCCCCTCTTTTGC ATTTAATGAACCGGCTAGAATTGGATAGAAGAGCGGTTGCTTGCGCTTTAACCTTTGGCTTGCAAGCCCCCTACTTGGTG CTTCCTGTAGGGTTTGGCTTGATTTTTCAAACCACCATTTTAGAGCAATTAAAAGCTAATGGCGTTAGCGCTACTCTAGC CCAAATCACAGGGGTGATGTGGATAGCGGGGTTAGCGATGGTTGTTGGGCTATTTGCCGCTGTATTAACGCTATACAAAA AACCCAGACACTACAAAGAAAAATCTTTTAACATAGAAAATTACGCTTCGCTCCAATTAAACTACCATGACTACTTGACT TTTATAGGGATTATCGTGGCGTTTGTGATCCAATTAGCCACCGATTCGATGCCCTTAGCCGCCTTTTTAGCGTTAGCGAT CATCTTATTAGGCCGCGGCATTAAGTTTAAAGAAACAGACTCGCTTATGGATGATAGCGTGAAAATGATGGCGTTTATCG CTTTTGTGATGTTAGTGGCTAGCGGGTTTGGAGAAGTGTTGCAAAAAGTGCATGCGATAGAAGGCTTAGTGAATGCGATC ACAAGCGTAGTCCAAGGGAAGCTTTTAGGGGCTTTTTTAATGCTTGTTGTAGGGCTTTTTATCACTATGGGGATAGGGAC TTCTTTTGGCACTATTCCTATCATCGCTGTGTTTTATGTCCCTTTATGCACGAAATTAGGTTTTAGCATAGAATCCACGA TTTTACTCATCGGCATAGCCGCAGCTTTAGGCGATGCAGGCTCACCGGCTAGCGATAGCACCATGGGGCCCACTTGCGGG CTTAACGCAGACAACCAACACAATCATATCTATGACACATGCGTGCCGACTTTTTTAGTCTATAACCTCCCTTTGATTGT TTTTGGAGTGGTTGGAGCGTTACTATTAGGCTAA Protein sequence : MLENSSIWSNPAFVAIICMSVLSLLRLNVMLSMISATLIAGFMGGLGITESFNAMIDGMKGNLNIALSYILLGALAVAIA KSNLIKVALSKLIGLMNYKRSTFCFLIAFIACFSQNLVPVHIAFIPILIPPLLHLMNRLELDRRAVACALTFGLQAPYLV LPVGFGLIFQTTILEQLKANGVSATLAQITGVMWIAGLAMVVGLFAAVLTLYKKPRHYKEKSFNIENYASLQLNYHDYLT FIGIIVAFVIQLATDSMPLAAFLALAIILLGRGIKFKETDSLMDDSVKMMAFIAFVMLVASGFGEVLQKVHAIEGLVNAI TSVVQGKLLGAFLMLVVGLFITMGIGTSFGTIPIIAVFYVPLCTKLGFSIESTILLIGIAAALGDAGSPASDSTMGPTCG LNADNQHNHIYDTCVPTFLVYNLPLIVFGVVGALLLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CpC231_1474 | YP_005683838.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 2e-57 | 42 |
| CpI19_1481 | YP_005685924.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 2e-57 | 42 |
| Cp1002_1472 | YP_005681739.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 2e-57 | 42 |
| cpfrc_01481 | YP_003783881.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 2e-57 | 42 |
