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Name : rplS (HMPREF4655_21336) Accession : YP_005770408.1 Strain : Helicobacter pylori 35A Genome accession: NC_017360 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : - COG ID : - EC number : - Position : 1344415 - 1344771 bp Length : 357 bp Strand : - Note : COG: COG0335; Pfam: PF01245; InterPro: IPR001857 DNA sequence : ATGAAAAACCGCTACATTCAGCAGTTTGAAGACGCTCAATTAAAAGACAAGACCATGCCAGCGTTTAAAGCCGGCGATAC TTTGAGACTTGGTATCACCATTAAAGAAGGCGAAAAAACACGAACTCAGTATTTTGAAGGCGTGTGCATTGCGATTAGAG GCAATGGCGTGGATAAGACTTTTTGCGTGCGTAAAATAGGGGCTAACAATATCGGCGTGGAGAAAATTTTCCCTTTTTAT AGCGAAAGTTTGGCGAGCGTTGAGGTGTTGCGTGTGGGTAGGGTGCGCCGCGCGAAGCTCTACTATTTGCGCGATAGGAG AGGTAAGGCAGCAAGGATTAAAGAAGTCCGCCATTAA Protein sequence : MKNRYIQQFEDAQLKDKTMPAFKAGDTLRLGITIKEGEKTRTQYFEGVCIAIRGNGVDKTFCVRKIGANNIGVEKIFPFY SESLASVEVLRVGRVRRAKLYYLRDRRGKAARIKEVRH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 4e-24 | 52 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 3e-21 | 50 |
