|
Name : gpmI (HMPREF4655_21208) Accession : YP_005770286.1 Strain : Helicobacter pylori 35A Genome accession: NC_017360 Putative virulence/resistance : Unknown Product : phosphoglycerate mutase Function : - COG functional category : - COG ID : - EC number : 5.4.2.1 Position : 1208340 - 1209815 bp Length : 1476 bp Strand : + Note : COG: COG0696; Pfam: PF06415, PF01676; InterPro: IPR005995 DNA sequence : ATGGCGCAAAAAACTCTTTTGATTATCACTGATGGTATCGGGTATCATAAAGATAGCGATCATAACGCATTCTTTCATGC TAAAAAACCCACTTATGACTTGATGTTTAAAACCTTGCCTTATAGCCTGATTGATACGCATGGCTTGAGCGTGGGCTTAC CTGAGGGGCAAATGGGAAATTCTGAAGTGGGGCATATGTGTATTGGGGCTGGCAGGGTGCTGTATCAAGATTTAGTTAAA ATTTCTTTAAGCCTTCAAAACGATGGGTTAAAAAACAACCCCGCTTTTTTAAACACGATCCACAAAAGCAAAATGGTGCA TCTTATGGGTTTAATGAGCGATGGAGGCGTGCATTCACACATTGAGCATTTTATCGCTTTGGCTTTAGAGTGTGAAAAAT CTCGTAAAAAAGTCTGTCTGCATTTGATCACCGATGGGCGCGATGTCGCTCCTAAAAGCGCTTTAACTTATTTAAAACAA ATGCAAAATATCTGCAATGAAAACATTCAAATCGCTACCATAAGCGGTCGTTTTTATGCCATGGATAGGGATAATCGCTT TGAAAGGATTGAGCTTGCGTATCACAGCTTAATGGGGCTTAATAACACGCCTTTAAGCCCTAGCGAGTATATCCAAAGCC AGTATGATAAAAATACCACCGATGAATTTATCATGCCCGCTTGTTTTAAGAATTATTGCGGCATGCAAGATGATGAAAGC TTCATTTTTATCAATTTCAGGAATGATAGGGCTAGAGAAATCGTGAGCGCTTTAGGCCAAAAGGAATTTAATGGCTTTGA GCGCGAAACTTTTAAAAAACTCCATATCGCTACCATGACGCCTTATGATAACACTTTCCCATACCCTGTTTTATTCCCCA AAGAAAGCGTTCAAAACACGCTCGCTAAAGTGGTCTCTCAACACAACCTGACCCAAAGCCATATCGCTGAAACTGAAAAA TACGCGCATGTAACCTTTTTCATCAATGGTGGGGTGGAAGCGCCTTTTAAAAATGAAAACCGGGTGCTTATCCAAAGCCC AAAAGTAACCACTTATGATTTAAAGCCTGAAATGAGCGCTAAAGAAGTAACCCTTGCGGTGTTAGAGCAAATGAAATCAG GCACGGATTTGATCATTGTGAATTTTGCTAATGGCGATATGGTAGGGCATACGGGGAATTTTGAAGCGAGCATCAAAGCG GTAGAAGCGGTGGATGCATGCTTAGGGGAAATCCTTTCATTGGCTAAAAAATTGGATTACGCCATGCTTTTAACCAGCGA TCATGGGAATTGCGAACGCATGAAAGATGAAAATCAAAACCCCTTAACCAACCACACCGCCGGGAGCGTGTATTGTTTTG TTTTAGGGAATGGAGTTAGATCCATTAAAAACGGAGCGCTAAACAATATCGCTAGCAGCGTGTTAAAACTCATGGGCCTT AAAGCCCCAGCAACGATGGACGAACCCCTATTTTAA Protein sequence : MAQKTLLIITDGIGYHKDSDHNAFFHAKKPTYDLMFKTLPYSLIDTHGLSVGLPEGQMGNSEVGHMCIGAGRVLYQDLVK ISLSLQNDGLKNNPAFLNTIHKSKMVHLMGLMSDGGVHSHIEHFIALALECEKSRKKVCLHLITDGRDVAPKSALTYLKQ MQNICNENIQIATISGRFYAMDRDNRFERIELAYHSLMGLNNTPLSPSEYIQSQYDKNTTDEFIMPACFKNYCGMQDDES FIFINFRNDRAREIVSALGQKEFNGFERETFKKLHIATMTPYDNTFPYPVLFPKESVQNTLAKVVSQHNLTQSHIAETEK YAHVTFFINGGVEAPFKNENRVLIQSPKVTTYDLKPEMSAKEVTLAVLEQMKSGTDLIIVNFANGDMVGHTGNFEASIKA VEAVDACLGEILSLAKKLDYAMLLTSDHGNCERMKDENQNPLTNHTAGSVYCFVLGNGVRSIKNGALNNIASSVLKLMGL KAPATMDEPLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00298 | YP_008207763.1 | Phosphoglyceromutase | Not tested | AbaR25 | Protein | 3e-91 | 44 |
| BJAB0868_00302 | YP_008211628.1 | Phosphoglyceromutase | Not tested | AbaR26 | Protein | 3e-91 | 44 |
