|
Name : glnA (HMPREF4655_21093) Accession : YP_005770180.1 Strain : Helicobacter pylori 35A Genome accession: NC_017360 Putative virulence/resistance : Virulence Product : glutamate--ammonia ligase Function : - COG functional category : - COG ID : - EC number : 6.3.1.2 Position : 1079131 - 1080576 bp Length : 1446 bp Strand : + Note : COG: COG0174; Pfam: PF03951, PF00120; InterPro: IPR004809 DNA sequence : ATGGTAGTAAGAACTCAAAATAGTGAAAGCAAAATCAAAGAATTTTTTGAATTTTGCAAAGAAAATGAAGTGGAATTTGT GGATTTTAGATTCAGCGATATTAAAGGCACTTGGAATCACATCGCTTATTCTTTTGGGGCTTTAACGCATGGCATGTTTA AAGAGGGGATTCCTTTTGATGCGAGTTCTTTTAAGGGCTGGCAAGGCATTGAACACTCCGATATGATTTTAACCCCCGAT TTGGTGCGTTATTTCATTAACCCTTTTAGCGCGGATGTGAGCGTGGTCGTGTTTTGCGATGTGTATGATGTGTATAAAAA CCAGCCTTATGAGAAATGCCCTAGAAGTATCGCTAAAAAAGCCTTACAACATTTAAAAGATTCAGGTTTGGGCGATATGG CTTATTTTGGCGCGGAGAATGAATTTTTCATCTTTGATTCCATTAAAATTAAAGACGCTTCCAATTCCCAATACTATGAA GTGGATAGCGAAGAGGGCGAATGGAATAGGGATAGAAGTTTTGAAAATGGCGTGAATTTTGGGCATAGACCGGGCAAGCA AGGGGGTTATATGCCCGTGCCGCCAACGGATACGATGATGGATATTCGCACTGAAATTGTGAAAGTCTTAAACCAAGTGG GGTTGGAAACTTTTGTCGTCCATCATGAAGTCGCGCAAGCGCAAGGCGAAGTGGGCGTGAAATTTGGGGATTTAGTGGAA GCTGCTGACAATGTCCAAAAACTCAAATATGTGGTTAAAATGGTCGCTCATTTAAACGGCAAAACCGCCACTTTCATGCC AAAACCTTTATATGGGGATAACGGGAGCGGGATGCACACCCATGTGAGTGTTTGGAAAAACAACGAAAACCTTTTTAGCG GCGAAACTTACAAAGGCTTGAGCGAGTTGGCGTTGCATTTTTTAGGAGGCGTGTTGCGCCACGCTAGAGGGTTAGCCGCT TTCACTAACGCTTCCACTAATTCTTACAAACGCCTAATTCCTGGCTATGAAGCCCCATCTATTTTAACTTATTCGGCTAA CAACAGGAGCGCGAGCGTGCGTATCCCTTATGGGATTTCTAAAAACAACGCAAGGTTTGAATTCAGATTTCCCGATAGCT CATCAAACCCCTACTTGGCTTTTGCAGCGATTTTAATGGCGGGCATGGATGGCATTAAAAACAAGATTGATCCCGGCGAA GCGATGGATATTAATCTTTTCAAATTGACTTTAGATGAAATCAGAGAAAAGGGTATCAAACAAATGCCCCACACTTTAAG GAGATCGTTAGAAGAAATGCTAGCCGATAAGCAGTATTTAAAAGAGGGTCAGGTCTTTAGCGAAGAATTTATTCAAGCCT ATCAGTCTCTTAAATTCAACGCTGAAGTGTTCCCATGGGAGAGCAAACCCCATCCTTTTGAATTTATCACCACTTATTCA TGTTAA Protein sequence : MVVRTQNSESKIKEFFEFCKENEVEFVDFRFSDIKGTWNHIAYSFGALTHGMFKEGIPFDASSFKGWQGIEHSDMILTPD LVRYFINPFSADVSVVVFCDVYDVYKNQPYEKCPRSIAKKALQHLKDSGLGDMAYFGAENEFFIFDSIKIKDASNSQYYE VDSEEGEWNRDRSFENGVNFGHRPGKQGGYMPVPPTDTMMDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFGDLVE AADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSVWKNNENLFSGETYKGLSELALHFLGGVLRHARGLAA FTNASTNSYKRLIPGYEAPSILTYSANNRSASVRIPYGISKNNARFEFRFPDSSSNPYLAFAAILMAGMDGIKNKIDPGE AMDINLFKLTLDEIREKGIKQMPHTLRRSLEEMLADKQYLKEGQVFSEEFIQAYQSLKFNAEVFPWESKPHPFEFITTYS C |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 0.0 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| glnA | YP_005770180.1 | glutamate--ammonia ligase | VFG1399 | Protein | 2e-89 | 45 |
