|
Name : hslU (HMPREF4655_21089) Accession : YP_005770176.1 Strain : Helicobacter pylori 35A Genome accession: NC_017360 Putative virulence/resistance : Unknown Product : ATP-dependent hsl protease ATP-binding subunit HslU Function : - COG functional category : - COG ID : - EC number : - Position : 1074538 - 1075869 bp Length : 1332 bp Strand : - Note : COG: COG1220; Pfam: PF07724; InterPro: IPR004491 DNA sequence : ATGTCTGAATTGAATATGACCCCAAGAGAAATTGTCGCTTATTTAGATGAATATATCATTGGGCAAAAGGAAGCTAAAAA GTCTATCGCTATCGCTTTTAGGAATCGTTACAGGCGTTTGCAACTAGAAAAATCCTTACAAGAAGAAATCACGCCTAAAA ACATTTTAATGATTGGATCTACTGGCGTGGGTAAAACTGAAATCGCCAGAAGAATAGCAAAAATCATGAAACTCCCCTTT GTGAAAGTGGAAGCGAGCAAATACACAGAAGTGGGTTTCGTGGGGCGCGATGTGGAGTCTATGGTAAGGGATTTAGTCAA TAACAGCGTGCTTTTAGTGGAAAATGAGCATAAAGAAAAGTTAAAAGACAAGATTGAAGAAGCGGTTATAGAAAAAATCG CTAAAAAATTCCTACCCCCTTTGCCTAATGGGGTGAGCGAAGAAAAAAAACAAGAATACGCCAACAGCCTTTTGAAAACG CAACAAAGAATCGCACAAGGCGAGTTGGATAACCGAGAAATTGAAATTGAAGTGCGTAAAAAAAGCATAGAGATTGATTC TAATGTGCCGCCTGAAATTTTAAGGGTTCAAGAAAACTTGATTAAGGTTTTCCATAAAGAACATGATAAAGTCAAAAAAA CTTTAAGCGTTAAAGAGGCTAAAGAAGCCCTAAAAGCAGAAATTAGCGACACGCTTTTAGACAGCGAATCCATTAAAATG GAAGGCTTGAGGCGTGCGGAAAGTTCAGGGGTGATTTTTATTGATGAAATTGATAAGATCGCTGTAAGCTCTAAAGAAGG AGGCCGTCAAGATCCCAGTAAAGAGGGGGTTCAAAGGGATTTGTTGCCGATTGTAGAGGGGAGTGTGGTGAATACGAAGT ATGGTTCTATTAAAACAGAGCATATTTTATTCATTGCAGCAGGGGCTTTTCATCTTGCTAAGCCAAGCGATCTCATCCCT GAATTGCAAGGCCGTTTCCCTTTAAGGGTGGAGTTAGAGAGTTTAACTGAAGAAATCATGTATATGATTTTAACCCAAAC TAAAACCTCTATCATCAAGCAATACCAAGCCCTTTTAAAAGTGGAAGGCGTAGAAATTGCGTTTGAAGATAATGCGATCA AAGAGTTAGCCAAACTCTCTTATAACGCCAATCAAAAAAGCGAAGATATAGGCGCTAGAAGGTTGCATACCACCATTGAA AAAGTGCTAGAAGACATTAGTTTTGAAGCGGAGGATTATTCTGGGCAAAATGTTACTATCACTAAAGAGTTGGTTCAATC AAAACTAGAGGATTTAGTGGCTGACGAAAATTTGGTGAAGTATATTTTATAA Protein sequence : MSELNMTPREIVAYLDEYIIGQKEAKKSIAIAFRNRYRRLQLEKSLQEEITPKNILMIGSTGVGKTEIARRIAKIMKLPF VKVEASKYTEVGFVGRDVESMVRDLVNNSVLLVENEHKEKLKDKIEEAVIEKIAKKFLPPLPNGVSEEKKQEYANSLLKT QQRIAQGELDNREIEIEVRKKSIEIDSNVPPEILRVQENLIKVFHKEHDKVKKTLSVKEAKEALKAEISDTLLDSESIKM EGLRRAESSGVIFIDEIDKIAVSSKEGGRQDPSKEGVQRDLLPIVEGSVVNTKYGSIKTEHILFIAAGAFHLAKPSDLIP ELQGRFPLRVELESLTEEIMYMILTQTKTSIIKQYQALLKVEGVEIAFEDNAIKELAKLSYNANQKSEDIGARRLHTTIE KVLEDISFEAEDYSGQNVTITKELVQSKLEDLVADENLVKYIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 0.0 | 97 |
