Name : HMPREF4655_21082 (HMPREF4655_21082) Accession : YP_005770169.1 Strain : Helicobacter pylori 35A Genome accession: NC_017360 Putative virulence/resistance : Virulence Product : cag pathogenicity island protein Function : - COG functional category : - COG ID : - EC number : - Position : 1069051 - 1069560 bp Length : 510 bp Strand : - Note : - DNA sequence : TTGTTTGAGAAATGGATTGGTCTCTTTTTACTTCTTAATTCCTTAGCCTATCCATGCCAAAAAGTAACCATTAGTTTCAA GCAGTATGAGAATCTTATCCATATTCACCAAAAAGGCTGCGACAATGAAGTGGTGTGCAGAACGCTCATCTCTATTGCTT TATTGGAAAGTTCTTTAGGGTTGAACAACAAGCGCGAAATTTCCCTAAAAGACACTTCCTATTCCATGTTTCACATCACT TTGAACACCGCTAAAAAATTCTACCCCACCTATTCTAAAACGCTCCTCAAGTTCAAATTGCTCAATGATGTGGATTTTGC GATTTCATTGGCTAAAAGAATTTTGAAAGAAAATTTTGATTATTACAAACAAAAACACCCTAATAAAAGCGTGTATCAAT TAGTAGAAATGGCAGTAGGCGCTTACAATGGTGGAATGAAACACAACCCTAATGGCACTTATGTGAAAAAGTTCCGCTGT GTCTATTCTCAGGTGCGCTACAACGAGTAG Protein sequence : MFEKWIGLFLLLNSLAYPCQKVTISFKQYENLIHIHQKGCDNEVVCRTLISIALLESSLGLNNKREISLKDTSYSMFHIT LNTAKKFYPTYSKTLLKFKLLNDVDFAISLAKRILKENFDYYKQKHPNKSVYQLVEMAVGAYNGGMKHNPNGTYVKKFRC VYSQVRYNE |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
HP0523 | BAD13939.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-75 | 99 |
cag4 | YP_005777267.1 | cag island protein | Virulence | cag PAI | Protein | 5e-75 | 99 |
HP0523 | BAD14048.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-75 | 99 |
cag4 | YP_005774546.1 | cag island protein | Virulence | cag PAI | Protein | 1e-75 | 99 |
HP0523 | BAD13802.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 7e-76 | 99 |
HP0523 | BAD13884.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 7e-75 | 98 |
HP0523 | BAD13775.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 4e-75 | 98 |
cag4 | YP_005779067.1 | cag island protein | Virulence | cag PAI | Protein | 5e-75 | 98 |
HP0523 | BAD13829.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 9e-74 | 96 |
cag4 | YP_005775726.1 | cag island protein | Virulence | cag PAI | Protein | 1e-73 | 95 |
cag4 | AAR03946.1 | Cag4 | Virulence | cag PAI | Protein | 2e-72 | 95 |
cag4 | AAR03855.1 | Cag4 | Virulence | cag PAI | Protein | 9e-73 | 95 |
HP0523 | BAD13994.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 3e-73 | 95 |
HP0523 | BAD13856.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-73 | 95 |
HP0523 | NP_207319.1 | cag pathogenicity island protein (cag4) | Virulence | cag PAI | Protein | 4e-72 | 94 |
HP0523 | BAD13966.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 6e-53 | 94 |
HP0523 | BAD14022.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-71 | 93 |
HP0523 | BAD13911.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 4e-72 | 93 |
cag4 | AAR03886.1 | Cag4 | Virulence | cag PAI | Protein | 2e-67 | 93 |
cag4 | AAR03915.1 | Cag4 | Virulence | cag PAI | Protein | 3e-70 | 93 |
cag4 | AGC69794.1 | cag pathogenicity island protein 4 | Virulence | cag PAI | Protein | 1e-70 | 92 |
orf9 | NP_223190.1 | cag island protein | Virulence | cag PAI | Protein | 5e-66 | 92 |
cag4 | YP_003728743.1 | cag pathogenicity island protein gamma | Virulence | cag PAI | Protein | 2e-70 | 92 |
cag-gamma | AAF80194.1 | Cag-gamma | Virulence | cag PAI | Protein | 8e-70 | 91 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
HMPREF4655_21082 | YP_005770169.1 | cag pathogenicity island protein | VFG0283 | Protein | 1e-72 | 94 |