Name : HMPREF4655_21061 (HMPREF4655_21061) Accession : YP_005770148.1 Strain : Helicobacter pylori 35A Genome accession: NC_017360 Putative virulence/resistance : Virulence Product : cag pathogenicity island protein Function : - COG functional category : - COG ID : - EC number : - Position : 1044830 - 1045942 bp Length : 1113 bp Strand : + Note : - DNA sequence : ATGGCAGGTACACAAGCTATATATGAATCATCTTCTGCAGGCTTCTTATCGGAAATTTCCTCAATTATCTCAAGCACAAG TGGTGTTGCAGGGCCATTTGCAGGAATAGTAGCGGGTGCTATGTCAGCAGCGATTATTCCTATTGTTGTGGGATTTACTA ATCCGCAAATGACCGCTATCATGACCCAATACAATCAAAGCATCGCTGAAGCCGTAAGCATGCCTATGAAAGCCGCTAAC CAACAATACAACCAATTGTATCAAGGTTTTAACGATCAAAGCATGGCTGTGGGGAACAATATCTTAAATATCAGCAAATT AACAGGGGAATTTAATGCGCAAGGCAACACGCAAGGCGTGCAAATTAGTGCTGTTAATAGTCAGATTGCAAGCATTTTAG CGAGTAATACGACCCCTAAAAATCCTAGTGCTATTGAAGCTTATGCGACGAATCAAATCGCTGTTCCTAGTGTGCCAACA ACGGTTGAAATGATGAGCAGTATCTTAGGCAATATTACAAGTGCAGCGCCAAAATACGCCCTAGCCCTACAAGAGCAACT GCGTTCTCAAGCAAGCAACAGCTCAATGAATGATACAGCCGATTCCCTTGATAGCTGTACCGCTTTAGGTGCGCTTGCTA GCTCATCAAAAGTGTTTTTTAGTTGCATGCAAATTTCTATGACTCCTATGAGTGTCTCTATGCCCACTGTTTATGCCAAA TACCAAGCGTTGGTCGCTAATGCCCTAACTTCAGGCGTTAATCCTATGACCACTCCTGCATGCCCTATTGGGGACAAAGT TCTTGCCGTTTATTGCTATGCTGAAAAAGTAGCAGAAATTTTGAGAGAATACTATATAGAATTTGTGAAAAACAATACCA ATTTGTTGCAAAACGCTTCTCAAATGATACTTAATCAATCAGGATTAGCTACTAGCACCTATGACACTCAAGCGATTTCT AACATAAGCTCGCTATATAATTACAATATAGTAGCGAATAAATCTTTTTTAAAATCGCATTTGACTTATCTTGATTACGT CAAAGACAAACTTAAGGGGCAAAAAGATAGCTACTTAACAGAAAGGGTGCAAACTAAAATAATCGTGAAGTGA Protein sequence : MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVVGFTNPQMTAIMTQYNQSIAEAVSMPMKAAN QQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGVQISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPT TVEMMSSILGNITSAAPKYALALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFFSCMQISMTPMSVSMPTVYAK YQALVANALTSGVNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNASQMILNQSGLATSTYDTQAIS NISSLYNYNIVANKSFLKSHLTYLDYVKDKLKGQKDSYLTERVQTKIIVK |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
HP0541 | BAD14066.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 8e-159 | 99 |
HP0541 | BAD13957.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 8e-159 | 99 |
cagH | YP_005774530.1 | cag island protein | Virulence | cag PAI | Protein | 1e-158 | 99 |
HP0541 | BAD13847.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 7e-159 | 99 |
cagH | YP_005777282.1 | cag island protein | Virulence | cag PAI | Protein | 2e-159 | 99 |
HP0541 | BAD13793.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 4e-158 | 98 |
HP0541 | BAD13902.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 3e-158 | 98 |
HP0541 | BAD13984.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 3e-158 | 98 |
cagH | AAC44699.1 | CagH | Virulence | cag PAI | Protein | 8e-160 | 98 |
cagH | AGC69803.1 | cag pathogenicity island protein H | Virulence | cag PAI | Protein | 2e-158 | 98 |
HP0541 | BAD13929.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-158 | 98 |
HP0541 | BAD13820.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 4e-157 | 98 |
cagH | YP_005775741.1 | cag island protein | Virulence | cag PAI | Protein | 2e-157 | 98 |
cag20 | AAR03875.1 | Cag20 | Virulence | cag PAI | Protein | 1e-158 | 98 |
HP0541 | BAD13874.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-157 | 98 |
HP0541 | NP_207337.1 | cag pathogenicity island protein (cag20) | Virulence | cag PAI | Protein | 9e-158 | 98 |
cag20 | AAR03933.1 | Cag20 | Virulence | cag PAI | Protein | 1e-158 | 98 |
cag20 | AAR03964.1 | Cag20 | Virulence | cag PAI | Protein | 2e-157 | 98 |
cagH | YP_003728723.1 | cag pathogenicity island protein H | Virulence | cag PAI | Protein | 6e-158 | 98 |
cag20 | AAR03903.1 | Cag20 | Virulence | cag PAI | Protein | 1e-158 | 98 |
HP0541 | BAD14012.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 8e-158 | 98 |
cagH | YP_005779052.1 | cag island protein | Virulence | cag PAI | Protein | 5e-158 | 98 |
cagH | NP_223207.1 | cag island protein | Virulence | cag PAI | Protein | 2e-158 | 97 |
HP0541 | BAD14039.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 8e-157 | 97 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
HMPREF4655_21061 | YP_005770148.1 | cag pathogenicity island protein | VFG0300 | Protein | 4e-158 | 98 |