Gene Information

Name : tnpB (HMPREF4655_21053)
Accession : YP_005770140.1
Strain : Helicobacter pylori 35A
Genome accession: NC_017360
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1035074 - 1035358 bp
Length : 285 bp
Strand : +
Note : Pfam: PF07282; InterPro: IPR010095

DNA sequence :
TTGGAAAAGAATTACCTATCTACAAGTTTGCTAGACTACAAACAACAGCATAATGGCAAATTGTTAGTGAAAGTTCCCCC
ACAATACACCAGCAAAACTTGCTGTAATTGTGGGAGCATCAACCCCAAACTCAAATTGAATCACAAGCAATATTTGTGTC
CTGATTGTGGGTATAAAGAACACAGAGATATTAACGCTGCGAACAATATCTTGAATAAAGGGTTAAGTCTTTTTAGGGCA
GGAAATGTCCTTGCAGACTTTAAAGAACAAAGCCTTTCGTGTTAG

Protein sequence :
MEKNYLSTSLLDYKQQHNGKLLVKVPPQYTSKTCCNCGSINPKLKLNHKQYLCPDCGYKEHRDINAANNILNKGLSLFRA
GNVLADFKEQSLSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpB YP_005777289.1 IS606 transposase Not tested cag PAI Protein 1e-33 91
tnpB YP_005774523.1 IS606 transposase Not tested cag PAI Protein 2e-26 90
tnpB YP_005779045.1 IS606 transposase Not tested cag PAI Protein 2e-33 89