Gene Information

Name : hslU (HPSAT_04195)
Accession : YP_005768483.1
Strain : Helicobacter pylori Sat464
Genome accession: NC_017359
Putative virulence/resistance : Unknown
Product : ATP-dependent protease ATP-binding subunit HslU
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 835076 - 836407 bp
Length : 1332 bp
Strand : -
Note : COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit

DNA sequence :
ATGTCTGAATTGAATATGACCCCAAGAGAAATTGTCGCTTATTTAGATGAATACATCATTGGGCAAAAGGAAGCTAAAAA
GTCTATCGCTATCGCTTTTAGGAATCGTTACAGGCGTTTGCAGCTGGAAAAATCCTTACAAGAAGAAATCACACCTAAAA
ACATTTTAATGATTGGATCTACTGGCGTGGGTAAAACTGAAATCGCAAGAAGAATAGCAAAAATCATGAAACTCCCCTTT
GTGAAAGTGGAAGCGAGCAAATACACAGAAGTGGGTTTTGTGGGGCGCGATGTGGAGTCTATGGTAAGGGATTTAGTCAA
TAACAGCGTGCTTTTAGTGGAAAATGAGCATAAAGAAAAACTAAAAGACAAGATTGAAGAAGCGGTTATAGAAAAAATCG
CTAAAAAACTCCTACCCCCCTTGCCTAATGGGGTGAGCGAAGAAAAAAAACAAGAATACGCTAACAGTCTTTTAAAAATG
CAACAAAGAATCGTGCAAGGCGAGTTGGATAGCCGAGAAATTGAAATTGAAGTGCGTAAAAAAAGCATAGAGATTGATTC
TAATGTGCCGCCTGAAATTTTAAGGGTTCAAGAAAATGTGATTAAGTTTTTCCATAAAGAACAGGATAAAGTCAAAAAAA
CTTTAAGCGTTAAAGAGGCTAAAGAAGCCCTAAAGGCAGAAATTAGCGACACGCTTTTAGATGGCGAAGCCATTAAAATG
GAAGGCTTGAAGCGTGCGGAAAGTTCAGGGGTGATTTTTATTGATGAAATTGATAAGATCGCTGTAAGCTCTAAAGAAGG
AGGCCGTCAAGATCCCAGTAAAGAGGGGGTTCAAAGGGATTTATTGCCGATTGTAGAGGGGAGTGTGGTGAATACGAAGT
ATGGTCCTATTAAAACAGAGCATATTTTATTCATTGCAGCAGGGGCTTTTCATCTTTCTAAGCCAAGCGATCTCATCCCT
GAATTGCAGGGGCGTTTCCCTTTAAGGGTGGAGTTAGAGAGTTTAACCGAAGAAATCATGTATATGATTTTAACCCAAAC
TAAAACTTCTATCATCAAGCAATACCAAGCCCTTTTAAAAGTGGAAGGCATAGAAATTGCGTTTGAAGACAATGCGATCA
AAGAGTTAGCCAAACTTTCTTATAACGCCAATCAAAAAAGCGAAGATATAGGTGCTAGAAGGTTGCACACCACCATTGAA
AAAGTGCTAGAAGACATTAGTTTTGAAGCGGAGGATTATTCTGGGCAAAATGTTACTATCACTAAAGAGTTAATCCAATC
AAAGCTAGAGGATTTAGTGGCTGATGAGAATTTAGTGAAGTATATTTTATAA

Protein sequence :
MSELNMTPREIVAYLDEYIIGQKEAKKSIAIAFRNRYRRLQLEKSLQEEITPKNILMIGSTGVGKTEIARRIAKIMKLPF
VKVEASKYTEVGFVGRDVESMVRDLVNNSVLLVENEHKEKLKDKIEEAVIEKIAKKLLPPLPNGVSEEKKQEYANSLLKM
QQRIVQGELDSREIEIEVRKKSIEIDSNVPPEILRVQENVIKFFHKEQDKVKKTLSVKEAKEALKAEISDTLLDGEAIKM
EGLKRAESSGVIFIDEIDKIAVSSKEGGRQDPSKEGVQRDLLPIVEGSVVNTKYGPIKTEHILFIAAGAFHLSKPSDLIP
ELQGRFPLRVELESLTEEIMYMILTQTKTSIIKQYQALLKVEGIEIAFEDNAIKELAKLSYNANQKSEDIGARRLHTTIE
KVLEDISFEAEDYSGQNVTITKELIQSKLEDLVADENLVKYIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 0.0 97