Gene Information

Name : HPSAT_04180 (HPSAT_04180)
Accession : YP_005768480.1
Strain : Helicobacter pylori Sat464
Genome accession: NC_017359
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 832281 - 833111 bp
Length : 831 bp
Strand : +
Note : COG0790 FOG: TPR repeat, SEL1 subfamily

DNA sequence :
ATGTTTAAAGATTTTTATCGCACCACTTTCTCTTTTTTAAAGCCTTTATTGCTTTTATTGTGTTTATTGTTGCCGTTTTC
GCTTCATGCAGATTCAGATGATTGCAGGATAACTTGTGTTTGGGATCAATACGCAAAGGAATTTAAGACAAATTTTTGTA
AATTTGGGTTAAACAATCTTAATTACGGCCAATACAAGCAAGCTTTCCAATTTTTTAGATGGGCACAAGAATACGGCATT
GGGCTTGGCAGTGTTTATTTAGCCAAAATGTATTTGGAAGGAAAGGGCGTGAAAAGGGATTACAAAAAAGCGCAACTCTA
TGCAAAAAACGCTATCAAAGGGTATGGGAGCGGGTTGTTGGGGGGCGCTCTTATTTTAGGACGCATGCAAGCAGAAGGCT
TAGGGATGAAAAAGGATTTGAAACAAGCGCTCAATACTTACAGGCAAGCACTTCGCGTATTTTCTAATAAAGGCATAAAT
TTTCATAACAATTTTAGATTACCAGATCTTACGGAAATGACTGGCATGCTTATTGGAGCGCGTTTCATTGATCTTTCAAG
TTTGAACGCGAATCCTATAAAATTTGAAAAGCAATTTGCAAACATGGTGGAGTTTGTCTTTGGCATTAAGAATGAACCAA
TAGTTCCTTATGATGCTGCTGAAATTTCAAGCAATATTATTTTACTCAAGCAACAAATGGGGGAAATCCTTTATAGAATT
GGGATCGCTTATCAAGAGGGGCTTGGCACCAAAAAGAAAAAGGAGAAGGCTAAAAAATTCTTGCAAAAATCCGCAGAATT
TGGCTATGAAAAAGCTATGGAAGCTCTGTAG

Protein sequence :
MFKDFYRTTFSFLKPLLLLLCLLLPFSLHADSDDCRITCVWDQYAKEFKTNFCKFGLNNLNYGQYKQAFQFFRWAQEYGI
GLGSVYLAKMYLEGKGVKRDYKKAQLYAKNAIKGYGSGLLGGALILGRMQAEGLGMKKDLKQALNTYRQALRVFSNKGIN
FHNNFRLPDLTEMTGMLIGARFIDLSSLNANPIKFEKQFANMVEFVFGIKNEPIVPYDAAEISSNIILLKQQMGEILYRI
GIAYQEGLGTKKKKEKAKKFLQKSAEFGYEKAMEAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HPB8_726 YP_003728747.1 chitin synthase regulatory factor 3 Not tested cag PAI Protein 3e-56 72