|
Name : HPCU_03015 (HPCU_03015) Accession : YP_005766677.1 Strain : Helicobacter pylori Cuz20 Genome accession: NC_017358 Putative virulence/resistance : Unknown Product : glutamate racemase Function : - COG functional category : - COG ID : - EC number : 5.1.1.3 Position : 600842 - 601609 bp Length : 768 bp Strand : - Note : COG0796 Glutamate racemase DNA sequence : ATGAAAATAGGCGTTTTTGATAGCGGTGTGGGAGGGTTTAGCGTTTTAAAAAGCCTTTTAAAAGTGCAATTATTTGATGA AATCATCTATTATGGCGATAGCGCTAGAGTGCCTTATGGCACTAAAGACCCCACCACGATCAAGCAATTTGGCTTAGAGG CTCTGGATTTTTTCAAACCGCACAAGATTGAATTATTGATTGTGGCATGCAACACAGCGAGCGCTCTAGCCTTAGAAGAG ATGCAAAAGCATTCCAAAATCCCTATTGTGGGCGTGATTGAGCCAAGCATTTTATCGATCAAACAACAAGTAAAAGATAA AAACGCCCCTATTTTAGTGTTAGGGACAAAAGCGACGATTCAATCCAACGCTTATGATAACGCCCTGAAACAACAAGGAT ATTTGAATGTTTCGCATTTAGCCACTTCTCTTTTTGTGCCTTTGATTGAAGAAAATATTTTAGAGGGCGAATTGCTAGAA ACTTGCATGCGTTATTATTTCACTCCATTAGAGATTTTACCTGAAGTGGTTATTTTAGGTTGCACGCATTTTCCCTTGAT CGCTCACCAAATTGAGGGCTATTTTATGGAGCATTTTGCCCTTTCAACGCCCCCTCTACTCATCCATTCTGGCGATGCTA TTGTGGAATATTTGCAGCAAAAATACGCCCTTAAGAAAAATGCATGCACATTCCCTAAAGTGGAATTTCATGCGAGCGGC GATGTGGTTTGGCTAGAAAAACAGGCTAAAGAATGGCTCAAATTGTAA Protein sequence : MKIGVFDSGVGGFSVLKSLLKVQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHKIELLIVACNTASALALEE MQKHSKIPIVGVIEPSILSIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGYLNVSHLATSLFVPLIEENILEGELLE TCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNACTFPKVEFHASG DVVWLEKQAKEWLKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glr | AAR03882.1 | glutamate racemase | Not tested | cag PAI | Protein | 3e-102 | 98 |
| HP0549 | BAD13991.1 | - | Not tested | cag PAI | Protein | 2e-102 | 98 |
| HP0549 | BAD13881.1 | - | Not tested | cag PAI | Protein | 8e-99 | 98 |
| glr | AAR03910.1 | glutamate racemase | Not tested | cag PAI | Protein | 4e-100 | 97 |
| HP0549 | NP_207344.1 | glutamate racemase | Not tested | cag PAI | Protein | 8e-101 | 96 |
| glr | AAR03971.1 | glutamate racemase | Not tested | cag PAI | Protein | 3e-100 | 95 |
| glr | AAR03940.1 | glutamate racemase | Not tested | cag PAI | Protein | 5e-99 | 95 |
| glr | AAC44708.1 | Glr | Not tested | cag PAI | Protein | 1e-99 | 95 |
| murI | NP_223214.1 | glutamate racemase | Not tested | cag PAI | Protein | 3e-98 | 93 |
