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Name : HPCU_01345 (HPCU_01345) Accession : YP_005766357.1 Strain : Helicobacter pylori Cuz20 Genome accession: NC_017358 Putative virulence/resistance : Unknown Product : integrase/recombinase (xerD) Function : - COG functional category : - COG ID : - EC number : - Position : 265152 - 266228 bp Length : 1077 bp Strand : - Note : COG0582 Integrase DNA sequence : ATGAAAAAATCAAATGACAATAACGCACTCGCCAGAAGTCAAAGGGAGTTGTTTGTAGGGATTAGGGATTTTATTGTTTT TAAATTTAAGCGTATGGTTGTTTTTAACGGAGTAAGGGATTTTACAAAAATGAGATTTTTGTCCATAGAATTAGAAAAAT GCGAAAATATTAAAGATTTGGAAAAATTATGTCATACAATTTATAATCAAGGCACAAAGCATATTTTGATGATGCGTGTA TTGTTTTTATTCTTTGACTATTTTTGCAAGAATTTGAAAGTTAAGCGATTGAGACTAATCAATGAAGAAATGCTTGTGAA TTTTTTATTTGAGTTAGCTAAACAAAGAAAGATTAATTCAATGGCAAAATATGTAATGTATATTAGGCAATTTTTTGATT ACTTGGATAGGACTAAACATTATGAATTTTATTTTAGTCTTAAAAATATAGCCTTTGCTAAACACAAGGATAATTTGCCT AAACATCTAAATTCAAAAGATTTAAAATCTTTTATATATACTCTTATAAACTATAGAACTAGAAGCAGTTATGAAAAGAG AAATAAGTGTATTTTGCTCTTAATTATTTTGGGTGGTTTGAGAAAATCTGAGGTTTTTAATTTAGAATTGAGAAATATTG TTTTAGAGAAAGAGCATTATATCTTGCTTATAAAAGGCAAAAACAATAAAGAGCGAAAAGCGTTCATTAAACGAGAAATG CTAGAAAAATCTTTAGATGAGTGGTTGGGTGATAGCAAACGATTGAGTAGTTTTAATGGGCGTTTTGTATTTAAGAAGTC TTTGTCTAACTATACTCAAAAGCATTGTTCAATCAGTAATTTTGTGTTAAAGATTTTTATGTTGAGTGGTATTGAAAATT TTAAACAATATGGCACAGGATTGCACCTATTTAGGCATAGTTTTGCCACTTTAGTCTATGCTAAGAGTAGGGATATTGTT TTGACTTCAAGAGCATTGGGGCATCAGTCCTTAAGCTCCACAAAAATCTACATTCACACCGCACAAGAATATAATAAACA AGTAGCAAGCATTTTTGATAATTTGTTGAGTGGGTGA Protein sequence : MKKSNDNNALARSQRELFVGIRDFIVFKFKRMVVFNGVRDFTKMRFLSIELEKCENIKDLEKLCHTIYNQGTKHILMMRV LFLFFDYFCKNLKVKRLRLINEEMLVNFLFELAKQRKINSMAKYVMYIRQFFDYLDRTKHYEFYFSLKNIAFAKHKDNLP KHLNSKDLKSFIYTLINYRTRSSYEKRNKCILLLIILGGLRKSEVFNLELRNIVLEKEHYILLIKGKNNKERKAFIKREM LEKSLDEWLGDSKRLSSFNGRFVFKKSLSNYTQKHCSISNFVLKIFMLSGIENFKQYGTGLHLFRHSFATLVYAKSRDIV LTSRALGHQSLSSTKIYIHTAQEYNKQVASIFDNLLSG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPP12_0437 | YP_002301073.1 | integrase/recombinase XercD family | Not tested | cag PAI | Protein | 5e-88 | 56 |
