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Name : HPCU_01220 (HPCU_01220) Accession : YP_005766336.1 Strain : Helicobacter pylori Cuz20 Genome accession: NC_017358 Putative virulence/resistance : Virulence Product : conjugal plasmid transfer system protein Function : - COG functional category : - COG ID : - EC number : - Position : 236678 - 238219 bp Length : 1542 bp Strand : + Note : COG3504 Type IV secretory pathway, VirB9 components DNA sequence : ATGAAAAAACTCACTCTATCGCTATTTTTATATTGTGCTTTACTTAGTGCTGAAGAGGATATTTTTAGAAACCATACAAA TGAAACTGATCTTACAAGTTCTTTTGAACATGGCAAAGAAAACAACAATCTTATCCCAGCAAAATCTGATAGTTTAGAAA GTTTCAAAGAACAAGAAAACAAAGAAAAAGCCAAACAGCTTATGGATTTAAAAGCCTTACAGAGCGTGTATTTTTCTAAA AATAGAAAATTGCAAGACAATAATTTTAATGTCTTATATGTGGCAGGCAACACCAACAAAATCCGCTTACGCTATGCGAT GACTACCACTTTTATTTTTGACAATGATCCTATTATCTATGTGAGTTTAGGAGATTCTAGCGGATTTGAACTCACTTACC CCACTAATGATCATTACGACTTGTCCAACATGCTAGTGATCAAACCCTTGCTTATAGGGGTGGATACAAACCTAACCGTA GTCGGAGCGAGCGGAACAATTTATACTTTTTACTTGTTTAGCACCACTTACACTAGCAAATTTCAAAGCTATTTTTCAGT GTTTGTCTCTAATAAAAGGGCTATCGGTAAGCTCAATATTTTGTCTAAAAACGAGCTAGAAAAAAGGGAGCAAGAACAAT GGGCTAAAACAGAAACAAATACAAATAGCTCCAATAAACAAGACAAACAAAAGCTTGACTACAGAAAAATCAATTATGAG AGCAAGGAAATTGATGATGGCAAGTTTATAAGAATTGGAGATGAAGTCAATCACATTTTCATTGAAAAAGCTAAAATCAA TCGTGGTTATTTGCAAAAACCCAAACACAAACGCACCTGGTGGAGTTTGTGGCTCTATAAAAAACCCAGTGATGATGCGC TTGATATAAAAGCACTAGATGTCTTTGATGATGGCAAATACACTTATTTTAGATATGACAGAGATCAAGCCTTTTCAAAA TTTCCTTACACCTATAAGGTTGTAGATGGGTATGATAATCCTATCAATAGCCGTGTGGTAGGGAATTATATTATTGCTGA AGATGTTTCTAAAAAATGGACTTTAAGGAGCGGTAAGGAATATGTGTGCGTAAGAAGAGATAAACACAAATACCAAAAAT CTAAGGACTTCATGCGCTTAAAAAGGCTTTTAGAGCAAGATGAAGCCATGAAAGCCAAACGAAACAACATTCACTTGATT GAAGACACTACGCCTCAACCTAAAAATGCCATTAGCGTAACGGAGTTGTTAGCTCAAATCAAAAACCAAACTCCAAATGA AAAATGCCGAGCCTTAAATGAAGAAGAAGTTAAGACTTTAGAAGAGGTTAAAAACATCATAAAAGCTCCCAAGCCTTTGC AAAAAGATTTGAAAAACAAGCTTAAAAAACACACAATCAAAACCCATTATTGCGTGCCTATCCCCTATATAGAAAGACCA AAAACCACTGATGGTTTAGAGAATAATAAAAAGGGGATGAATAACACCCCAAAACAAAATCAAGCAAACCCTATTAAAGA GATTAAAGAAAACAAGAAATGA Protein sequence : MKKLTLSLFLYCALLSAEEDIFRNHTNETDLTSSFEHGKENNNLIPAKSDSLESFKEQENKEKAKQLMDLKALQSVYFSK NRKLQDNNFNVLYVAGNTNKIRLRYAMTTTFIFDNDPIIYVSLGDSSGFELTYPTNDHYDLSNMLVIKPLLIGVDTNLTV VGASGTIYTFYLFSTTYTSKFQSYFSVFVSNKRAIGKLNILSKNELEKREQEQWAKTETNTNSSNKQDKQKLDYRKINYE SKEIDDGKFIRIGDEVNHIFIEKAKINRGYLQKPKHKRTWWSLWLYKKPSDDALDIKALDVFDDGKYTYFRYDRDQAFSK FPYTYKVVDGYDNPINSRVVGNYIIAEDVSKKWTLRSGKEYVCVRRDKHKYQKSKDFMRLKRLLEQDEAMKAKRNNIHLI EDTTPQPKNAISVTELLAQIKNQTPNEKCRALNEEEVKTLEEVKNIIKAPKPLQKDLKNKLKKHTIKTHYCVPIPYIERP KTTDGLENNKKGMNNTPKQNQANPIKEIKENKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB9-1 | YP_002301099.1 | VirB9 type IV secretion protein | Virulence | cag PAI | Protein | 0.0 | 99 |
