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Name : katA2 (hp908_0888) Accession : YP_005765388.1 Strain : Helicobacter pylori 908 Genome accession: NC_017357 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : - COG ID : - EC number : 1.11.1.6 Position : 863083 - 864600 bp Length : 1518 bp Strand : - Note : - DNA sequence : ATGGTTAATAAAGATGTGAAACAAACCACTGCTTTTGGCGCTCCCGTTTGGGATGACAACAATGTGATTACGGCCGGTCC TAGAGGTCCTGTTTTATTACAAAGCACTTGGTTTTTGGAAAAATTAGCGGCGTTTGACAGAGAAAGAATCCCTGAAAGGG TCGTGCATGCTAAAGGAAGTGGGGCTTATGGCACTTTCACTGTGACTAAAGACATCACTAAATACACTAAAGCAAAAATT TTCTCTAAAGTGGGTAAAAAAACCGAATGCTTTTTCAGATTTTCCACTGTGGCTGGTGAAAAAGGCAGTGCGGATGCGGT AAGAGACCCAAGAGGTTTTTCGATGAAGTATTACACTGAAGAAGGTAACTGGGATTTAGTAGGGAACAACACGCCTGTTT TCTTTATCCGTGATGCGATCAAATTCCCTGATTTCATCCACACTCAAAAACGAGATCCTCAAACCAATTTGCCTAACCCT GACATGGTATGGGATTTTTGGAGTAATGTTCCTGAAAGCTTATACCAAGTAACATGGGTTATGAGCGATAGAGGTATCCC TAAATCTTTCCGCCATATGGATGGTTTTGGCAGCCACACTTTCAGTCTTATCAACGCTAAAGGCGAACGCTTTTGGGTGA AATTCCACTTTGAAACCATGCAAGGCGTTAAGCACTTGACTAATGAAGAAGCCGCAGAAATCAGAAAGTATGATCCGGAT TCAAACCAAAGGGATTTATTCGATGCGATCGCTAGAGGGGATTTCCCAAAATGGAAAATGAGCATTCAAGTGATGCCAGA AGAGGACGCTAAAAAGTATCGATTCCATCCGTTTGATGTAACTAAAATCTGGTATCTCCAAGATTATCCGTTAATGGAAG TGGGCATTGTGGAGTTGAATAAAAATCCTGAAAACTATTTCGCAGAAGTGGAGCAAGCGGCATTCACTCCGGCTAATGTC GTTCCTGGAATTGGCTATAGCCCTGACAGGATGTTACAAGGGCGCTTGTTCTCTTATGGGGACACACACCGCTACCGCTT AGGGGTTAATTATCCTCAGATACCGGTTAACAGACCAAGATGCCCATTCCACTCTTCTAGCAGAGATGGTTACATGCAAA ATGGATACTACGGCTCTTTACAAAACTATACGCCTAGCTCATTGCCTGGTTATAAAGAAGATAAGAGCGCTAGGGATCCT AAGTTCAACTTAGCTCATATTGAAAAAGAGTTTGAAGTGTGGAATTGGGATTACAGAGCTGAAGATAGCGATTACTACAC CCAACCAGGCGATTACTACCGCTCATTGCCAGCTGATGAAAAAGAAAGGTTGTATGACACTATTGGAGGATCTTTAGCTC ATGTTACCCATAAGGAAATCGTGGATAAGCAATTGGAGCATTTCAAGAAAGCTGACCCCAAATACGCTGAGGGAGTTAAA AAAGCTCTTGAAAAACACCAAAAAATGATGAAAGACATGCATGCAAAAGACATGCATCACATGAAAAAGAAAAAGTAA Protein sequence : MVNKDVKQTTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKI FSKVGKKTECFFRFSTVAGEKGSADAVRDPRGFSMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNP DMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFETMQGVKHLTNEEAAEIRKYDPD SNQRDLFDAIARGDFPKWKMSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQAAFTPANV VPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNRPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDP KFNLAHIEKEFEVWNWDYRAEDSDYYTQPGDYYRSLPADEKERLYDTIGGSLAHVTHKEIVDKQLEHFKKADPKYAEGVK KALEKHQKMMKDMHAKDMHHMKKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 1e-135 | 60 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 4e-92 | 51 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 9e-90 | 47 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 9e-90 | 47 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 9e-90 | 47 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 9e-90 | 47 |
