|
Name : hslU (hp908_0515) Accession : YP_005765018.1 Strain : Helicobacter pylori 908 Genome accession: NC_017357 Putative virulence/resistance : Unknown Product : ATP-dependent hsl protease Function : - COG functional category : - COG ID : - EC number : - Position : 493882 - 495213 bp Length : 1332 bp Strand : + Note : - DNA sequence : ATGTCTAAATTGAATATGACCCCAAGAGAAATTGTCGCTTATTTAGATGAGTACATTATTGAGCAAAAGGAAGCTAAAAA GTTTATCGCTATCGCTTTAAGGAATCGTTACAGGCGTTTGCAACTGGAAAAATACTTACAAGAAGAAATCACGCCTAAAA ACATTTTAATGATTGGCTCTACTGGCGTGGGTAAAACTGAAATCGCAAGAAGAATGGCAAAAATCATGAAACTCCCCTTT GTGAAAGTGGAAGCGAGCAAATACACAGAAGTGGGTTTTGTGGGGCGCGATGTGGAGTCTATGGTAAGGGATTTAGTCAA TAACAGCGTGCTTTTAGTGGAAAATGAGCATAAAGAAAAATTAAAAGACAAGATTGAAGAGGCGGTTGTAGAAAAAATCG CTAAAAAACTCTTACCCCCTTTGCCCAGTGGCGTGAGCGAAGAGAAAAAACAAGAATACGCTAACAGCCTTTTAAAAATG CAACAAAGAATCGTGCAAGGCGAGTTGGATAGTAGAGAAATTGAAATTGAAGTGCGTAAAAAAAGCATAGAGATTGATTC TAATGTGCCGCCTGAAATTTTAAGGGTTCAAGAAAATTTGATTAAGGTTTTCCATAAAGAACAGGATAAAGTCAAAAAAA CTTTAAGCGTTAAAGAGGCTAAAGAAGCCCTAAAAGCAGAAATTAGCGACACGCTTTTAGATGGCGAAGCTATTAAAATG GAGGGTTTGAAGCGTGCGGAAAGTTCAGGGGTGATTTTTATTGATGAAATTGATAAGATCGCTGTCAGCTCTAAAGAAGG AAGCCGTCAAGATCCCAGTAAAGAGGGGGTTCAAAGGGATTTGTTGCCGATTGTAGAGGGGAGTGTGGTGAATACGAAGT ATGGTTCTATTAAAACAGAGCATATTTTATTCATTGCGGCAGGGGCTTTTCATCTTTCTAAACCAAGCGATTTGATCCCT GAATTACAGGGCCGTTTCCCTTTAAGGGTGGAGTTAGAGAATTTAACCGAAGAAATCATGTATATGATTTTAACCCAAAC TAAAACCTCTATCATCAAGCAATACCAAGCCCTTTTAAAAGTGGAGGGCGTAGAAATTGCGTTTGAAGACGATGCGATCA AAGAGTTAGCCAAACTTTCTTATAACGCCAATCAAAAAAGCGAAGATATAGGCGCTAGAAGGTTGCACACCACCATTGAA AAAGTACTAGAAGACATTAGTTTTGAAGCGGAGGATTATTCTGGGCAATGTATCACTATCACTAAAGAATTGGTTCAATC CAAGCTAGGGGATTTAGTGGCTGATGAAAATTTGGTGAAGTATATTTTATAA Protein sequence : MSKLNMTPREIVAYLDEYIIEQKEAKKFIAIALRNRYRRLQLEKYLQEEITPKNILMIGSTGVGKTEIARRMAKIMKLPF VKVEASKYTEVGFVGRDVESMVRDLVNNSVLLVENEHKEKLKDKIEEAVVEKIAKKLLPPLPSGVSEEKKQEYANSLLKM QQRIVQGELDSREIEIEVRKKSIEIDSNVPPEILRVQENLIKVFHKEQDKVKKTLSVKEAKEALKAEISDTLLDGEAIKM EGLKRAESSGVIFIDEIDKIAVSSKEGSRQDPSKEGVQRDLLPIVEGSVVNTKYGSIKTEHILFIAAGAFHLSKPSDLIP ELQGRFPLRVELENLTEEIMYMILTQTKTSIIKQYQALLKVEGVEIAFEDDAIKELAKLSYNANQKSEDIGARRLHTTIE KVLEDISFEAEDYSGQCITITKELVQSKLGDLVADENLVKYIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 0.0 | 97 |
