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Name : hp908_0278 (hp908_0278) Accession : YP_005764782.1 Strain : Helicobacter pylori 908 Genome accession: NC_017357 Putative virulence/resistance : Unknown Product : ClpB protein Function : - COG functional category : - COG ID : - EC number : - Position : 263291 - 265861 bp Length : 2571 bp Strand : + Note : - DNA sequence : ATGAATTTATTTGAAAAAATGACTGACCAATTGCATGAGGCTTTAGACAGCGCGCTCGCTTTAGCTTTGCACTATAAGAA CGCTGAAGTAACGCCCATGCACATGCTTTTTGCCATGCTCAATAACTCCCAAGGCATTCTCCTTAAAGCCTTACAAAAAA TGCCTGTGGATATTGAAGCTTTAAAACTTAGCGTTCAAAGCGAGTTGAATAAGTTCGCTAAAGTTTCACAAATCAGCAAG CAAAACATCCAATTAAACCAAGCTTTAATCCAAAGTTTAGAAAACGCTCAAGGCTTGATGGCTAAAACGGGCGATTCTTT CATCGCTACCGATGCGTATCTTTTGGCGAATATGAATCTTTTTGAAAGCGTTCTAAAGCCTTATTTAGACACTAAGGAAT TGCAAAAAACTTTAGAATCTTTAAGAAAAGGCAGGACTATCCAGGATAAAAATGATGATTCCAATTTAGAAAGTTTAGAA AAATTTGGCATTGATTTGACGCAAAAAGCCTTAGAAAATAAGTTGGATCCCGTGATCGGGAGAGATGAAGAAATCATTCG CATGATGCAAATTTTGATCAGAAAAACAAAAAATAACCCTATTTTATTGGGTGAGCCTGGAGTGGGGAAAACGGCTGTTG TGGAAGGGCTAGCCCAACGCATTGTGAATAAGGAAGTGCCTAAAACGCTTTTAAACAAACGGGTTGTCGCTTTAGATTTA AGCTTATTGGTGGCTGGGGCGAAATACAGAGGCGAGTTTGAAGAGCGCCTGAAAAAGGTGATTGAAGAAGTTAAAAAAAG CGCGAATGTGATTTTATTCATTGATGAAATCCACACGATTGTGGGGGCTGGGGCTAGTGAGGGGGGCATGGATGCGGCCA ATATTTTAAAACCCGCGCTCGCTAGGGGGGAATTGCACACGATTGGAGCGACCACTTTAAAAGAATACCGCAAGTATTTT GAAAAAGACATGGCGCTACAAAGGCGTTTCCAACCCATTTTACTCAATGAGCCTAGCATCAATGAAGCTTTACAGATTTT AAGGGGGTTGAAAGAAACTTTAGAAACGCACCATAATATCACCATCAATGACTCCGCGCTCATAGCGAGCGCTAAGCTCT CTAGCCGTTATATCACCGATAGGTTTTTACCCGATAAAGCGATTGATTTGATTGATGAGGGGGCGGCTCAATTAAAAATG CAAATGGAATCAGAGCCGGCCAAACTCTCTAGCGTGAAGCGCTCCATTCAAAGACTAGAAATGGAAAAACAAGCCCTTGA AATGGAAAACAAAGAGAGCAACCACAAACGCATGCAAGAAATCCTTAAAGAATTGAGCGATTTGAAAGAGAAAAAAATCC AATTAGAAGCGCAATTTGAAAACGAAAAAGAAGTGTTTAAAGAAATTTCACGCTTGAAAATGGAAATGGAGAGCTTGAAA AAAGAAGCCGAAAGGTTTAAACGCAATGGGGATTACCAGCAAGCGGCTGAAATTGAATACTCTAAAATCCCTGAAAAGGA AAAGAAAGAAAAAGAATTGCAGCATAAATGGGAAACGATGCAACAAAACGGGGCGTTGTTGCAAAACGCTTTAACCGAAA ACAACATCGCTGAGATCGTGAGCCAATGGACGCACATCCCGGTCCAAAAAATGCTCCAAAGCGAAAAAAATAGGGTTTTA AACATTGAAAGCGAATTGCAAAAAAGGGTGGTAGGGCAAGAAAAAGCGCTCAAAGCGATCGCTAAAGCGATTAAAAGGAA TAAGGCCGGGCTTAGCGATAGCAACAAGCCCATAGGGAGTTTCCTCTTTTTAGGGCCAACAGGCGTGGGTAAAACCGAGA GCGCTAAAGCCTTGGCACAATTCTTGTTTGATAGCGATAAAAATCTTATAAGGATTGACATGAGCGAATACATGGAAAAG CACGCTATCAGCCGTCTTATTGGGGCCGCTCCTGGGTATGTGGGCTATGAAGAAGGCGGGCAATTGACCGAAGCGGTGCG CAGAAAGCCTTATAGCGTGGTGCTGTTAGATGAAGTGGAAAAAGCCCATCCGGATGTGTTTAACCTTTTGTTGCAGGTTT TAGATGAGGGGCATTTAACCGATAGTAAGGGCGTGAGGGTGGATTTCAAAAACACGATTTTGATTTTAACCAGCAATGTG GCTAGCGGCGCGCTTTTAGAAGAGGATTTGAGTGAAGCCGATAAACAAAAAGCGATCAAAGAGAGCCTGAGGCAGTTCTT CAAGCCGGAATTTTTAAACCGCTTAGATGAAATCATCTCCTTTAACGCCCTAGATAGTCATGCTATCATCAATATCGTGG GGATACTCTTTGAAAACATTCAAAAAAAAGCGCTTGAAAGGGGCATTAATATAACCCTAGACGAAAAGGCAAAAGAATTG ATCGCCGAAGCAGGATTTGACAGATTCTATGGCGCTAGACCCCTAAAACGCGCGCTCTATGAAATGGTAGAAGACAAGCT CGCTGAACTCATTTTAGAAGATAAAATTAAAGAGAATGACAGCGTGGCGTTTGTGGTAGAAAATAACGAGATTGTGCCTA AGATTAAGTGA Protein sequence : MNLFEKMTDQLHEALDSALALALHYKNAEVTPMHMLFAMLNNSQGILLKALQKMPVDIEALKLSVQSELNKFAKVSQISK QNIQLNQALIQSLENAQGLMAKTGDSFIATDAYLLANMNLFESVLKPYLDTKELQKTLESLRKGRTIQDKNDDSNLESLE KFGIDLTQKALENKLDPVIGRDEEIIRMMQILIRKTKNNPILLGEPGVGKTAVVEGLAQRIVNKEVPKTLLNKRVVALDL SLLVAGAKYRGEFEERLKKVIEEVKKSANVILFIDEIHTIVGAGASEGGMDAANILKPALARGELHTIGATTLKEYRKYF EKDMALQRRFQPILLNEPSINEALQILRGLKETLETHHNITINDSALIASAKLSSRYITDRFLPDKAIDLIDEGAAQLKM QMESEPAKLSSVKRSIQRLEMEKQALEMENKESNHKRMQEILKELSDLKEKKIQLEAQFENEKEVFKEISRLKMEMESLK KEAERFKRNGDYQQAAEIEYSKIPEKEKKEKELQHKWETMQQNGALLQNALTENNIAEIVSQWTHIPVQKMLQSEKNRVL NIESELQKRVVGQEKALKAIAKAIKRNKAGLSDSNKPIGSFLFLGPTGVGKTESAKALAQFLFDSDKNLIRIDMSEYMEK HAISRLIGAAPGYVGYEEGGQLTEAVRRKPYSVVLLDEVEKAHPDVFNLLLQVLDEGHLTDSKGVRVDFKNTILILTSNV ASGALLEEDLSEADKQKAIKESLRQFFKPEFLNRLDEIISFNALDSHAIINIVGILFENIQKKALERGINITLDEKAKEL IAEAGFDRFYGARPLKRALYEMVEDKLAELILEDKIKENDSVAFVVENNEIVPKIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-138 | 46 |
