Gene Information

Name : hemC (hp908_0250)
Accession : YP_005764754.1
Strain : Helicobacter pylori 908
Genome accession: NC_017357
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.61
Position : 237531 - 238451 bp
Length : 921 bp
Strand : -
Note : -

DNA sequence :
GTGGGAAAATTAGTGATTGGCTCTAGGGGGAGCGAACTGGCCTTATGGCAAGCGAATCACATTAAAGAACGCCTGAAAAA
AGAATGCTCTATGGAAAGCGAGATTCGAATCGTTAAGACTAAAGGCGATAAAATCCTAGACACCCCTTTAAGTAAGATCG
GCGGTAAGGGGCTATTCACTAAAGAATTAGAAGAATTGCTTTTAAAAGGCGCAATTGATTTGGCGGTGCATTCTTTAAAA
GATGTGCCGGTCGTGTTTGAAAAGGGGTTAGACTTGGCATGCATCACCAAAAGGGCTGATGTGAGGGACACTTTTTTGAG
CGTGAAATTCCCTGATTTGATGAGCTTGCCTAAAGGGGCCAAGGTTGGCACGACTTCTTTAAGGCGCTCCATGCAGATCA
AATTCAAACGAAAAGATCTAGACACAGAAAGCTTAAGGGGGAATGTCCAAACCCGTTTGAAAAAGCTTGAATGCGGTGAA
TTTGACGCTATCATTTTAGCTGAAGCCGGGTTGTGCCGCTTAAACGTTCAAGGGGCGAAATACCGCAAGGCTTTTAGCGT
AAAAGAAATGATTCCTAGCATGGGTCAGGGGGCTTTAGGGGTAGAAATGCTCAAAAACCACAAGCATTTTATCACGCTTC
AAAAACTCAACGATGAAGAAAGCGCGTTTTGTTGCCATTTAGAAAGGGAGTTTATCAAAGGGCTTAATGGGGGGTGTCAG
ATCCCTATTGGCGTGCATGCGAATTTAATGGGCGATGAGGTTAAAATCCAGGCGGTTTTGGGCTTGCCTAATGGGAAAGA
AGTCATCACTAAAGAAAAGCAAGGGGATAAAAATAAGGCGTTTGATTTAGTGCGAGAGCTTTTAGAAGAATTTTTACAAA
GCGGGGCGAAAGAGATTTTAGAAAAGGCGCAGTTGTTTTAA

Protein sequence :
MGKLVIGSRGSELALWQANHIKERLKKECSMESEIRIVKTKGDKILDTPLSKIGGKGLFTKELEELLLKGAIDLAVHSLK
DVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGE
FDAIILAEAGLCRLNVQGAKYRKAFSVKEMIPSMGQGALGVEMLKNHKHFITLQKLNDEESAFCCHLEREFIKGLNGGCQ
IPIGVHANLMGDEVKIQAVLGLPNGKEVITKEKQGDKNKAFDLVRELLEEFLQSGAKEILEKAQLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 4e-43 46
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 4e-43 46