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Name : hp908_0116 (hp908_0116) Accession : YP_005764621.1 Strain : Helicobacter pylori 908 Genome accession: NC_017357 Putative virulence/resistance : Resistance Product : cystathionine gamma-lyase Function : - COG functional category : - COG ID : - EC number : 4.4.1.1 Position : 109162 - 110298 bp Length : 1137 bp Strand : - Note : - DNA sequence : ATGCAAACCAAATTAATCCATGGGGGCATTAGTGAGGATGCGACAACGGGGGCGGTGAGCGTGCCTATTTATCAGGCTTC CACCTACCGCCAAGACGCCATAGGCCGCCACAAGGGCTATGAATACTCTCGCTCAGGCAACCCCACGCGCTTTGCTTTAG AAGAGCTCATCGCTGATTTAGAAGGGGGGGTTAAGGGGTTTGCTTTTGCCTCTGGTTTAGCCGGAATCCACGCTGTCTTT TCCCTCTTGCAATCAGGCGATCATGTGTTATTGGGCGATGATGTCTATGGGGGGACTTTCCGCTTGTTTAATAAGGTGCT TGTCAAAAACGGGCTTTCTTGCACCATTATAGACACTAGCGACATATCCCAAATTAAAAAGGCTATCAAGCCCAACACCA AAGCCCTTTATTTAGAGACCCCTAGTAACCCCTTGCTTAAAATCACGGATTTAGCGCAATGCGCTAGTGTCGCTAAAGAT CATGGTTTGCTCACTATCGTGGATAACACCTTTGCCACCCCCTATTGCCAAAACCCGCTTCTTTTGGGGGCGGATATTGT GGCGCATAGCGGCACAAAATACTTAGGCGGGCATAGCGATGTGGTTGCTGGGCTTGTAACCACTAATAATGAAGCGCTAG CCCAAGAGATCGCTTTTTTTCAAAATGCTATCGGTGGGGTGCTAGGCCCTCAAGACAGCTGGCTGTTGCAAAGAGGGATT AAAACGCTGGGATTGCGCATGGAGGCCCATCAAAAAAACGCCCTTTGCGTGGCTGAATTTTTAGAAAAACACCCTAAAGT GGAAAGGGTTTATTACCCGGGTTTGCCCACTCACCCTAACCACGAGCTAGCCAAAGCCCAAATGCGTGGCTTTAGTGGGA TGCTCTCTTTCACCCTTAAAAATGACAGCGAGGCGGCTCTTTTTGTAGAAAGCCTTAAATTATTCATTTTAGGCGAGAGT TTGGGCGGAGTGGAAAGCTTGGTAGGGATTCCAGCGCTAATGACCCATGCATGTATCCCTAAAGAACAACGAGAAGCTGC TGGAATCAGAGATGGTTTGGTGCGCTTGTCTGTGGGGATTGAGCATGAACAGGATTTGCTAGAAGATTTAGAGCAAGCGT TCGCTAAAATAAGCTAA Protein sequence : MQTKLIHGGISEDATTGAVSVPIYQASTYRQDAIGRHKGYEYSRSGNPTRFALEELIADLEGGVKGFAFASGLAGIHAVF SLLQSGDHVLLGDDVYGGTFRLFNKVLVKNGLSCTIIDTSDISQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKD HGLLTIVDNTFATPYCQNPLLLGADIVAHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGI KTLGLRMEAHQKNALCVAEFLEKHPKVERVYYPGLPTHPNHELAKAQMRGFSGMLSFTLKNDSEAALFVESLKLFILGES LGGVESLVGIPALMTHACIPKEQREAAGIRDGLVRLSVGIEHEQDLLEDLEQAFAKIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 8e-99 | 55 |
| SAR0460 | YP_039909.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 1e-97 | 55 |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 4e-71 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hp908_0116 | YP_005764621.1 | cystathionine gamma-lyase | BAC0207 | Protein | 1e-61 | 43 |
