Gene Information

Name : HPV225_0544 (HPV225_0544)
Accession : YP_005763475.1
Strain : Helicobacter pylori v225d
Genome accession: NC_017355
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein (cagI)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 521829 - 522968 bp
Length : 1140 bp
Strand : -
Note : cag19

DNA sequence : 
GTGAAATGTTTTTTAAGCATATTTTCTTTCTTAACTTTTTTGTTTCTGAATGGTGGAGAGGTAGTAATAACGCTTGAACC
TGCCTTAAAAGCCATTCAGGCGGATGCACAAGCCAAACAAAAAACCGCTCAAGCCGAATTAAAAGCCATAGAGGCTCAAT
CTAATGCCAAAGAAAAAGCCATTCAAGCGCAAATAGAGGGAGAATTGAGAACTCAGCTTGCAACTATGAGCGCTATGTTA
AAAGGGGCTAATGGCGTTATTAATGGTGTCAATGGCATGACGGGGGGGTTTTTTGCAGGTTCAGACATCTTGCTTGGCAT
CATGGAAGGGTATTCAAGCGCGCTTAGCGCATTGGGGGGAAATGTCAAAATGATCGTGGAAAAACAAAAAATTAATACCC
AAACAGAAATCCAAAACATGCAAATCGCGCTCCAAAAAAATAACGAAATAATCAAGCTCAAAATGAACCAGCAAAACGCT
CTATTAGAAGCGTTAAAAAACAGCTTTGAACCGAGCGTTACCCTAAAAACACAAATGGAAATGCTTTCTCAAGCTCTAGG
AAGTTCTTCTGACAACACTAAATACATCGCTTACAATACGATTGGTATCAAGGCGTTTGAAGAAACCTTAAAAGGTTTTG
AAACATGGTTGAAAGTGGCTATGCAAAAAGCGACCCTTATTGACTACAATTCCCTAACAGGTCAGGCTTTGTTTCAAAGC
ACCATCTACGAGCCTGCTCTTGGTTTTTTTTCAAGCATGGGTACACCATTTGGAATCATTGAAACATTTACTCTAGCACC
CACAAAATGCCCCTATCTTGATGGGCTAAAAATTTCAGCATGCCTTATGGAACAGGTTATTCAGAATTACAGAAAGATTG
TAGCCCTTATTCAAAATAAACTGAATGATGCAGATTTTCAAAATATCGCTTATTTGAATGGGATCAATGAAGAAATCAAA
ACCTTAAAAGGATCAGTAGATTTGAATGCGCTCATAGAAGTTGCTATCTTAAACGCAGAAAATCATTTAAACTATATAGA
GAATCTTGAAAGAAAAGCCGACCTTTGGGAAGAACAACTGAAATTAGAGAGAGAAACGACAGCAAGAAACATTGCTAGCT
CTAAAGTTATTGTCAAATGA

Protein sequence : 
MKCFLSIFSFLTFLFLNGGEVVITLEPALKAIQADAQAKQKTAQAELKAIEAQSNAKEKAIQAQIEGELRTQLATMSAML
KGANGVINGVNGMTGGFFAGSDILLGIMEGYSSALSALGGNVKMIVEKQKINTQTEIQNMQIALQKNNEIIKLKMNQQNA
LLEALKNSFEPSVTLKTQMEMLSQALGSSSDNTKYIAYNTIGIKAFEETLKGFETWLKVAMQKATLIDYNSLTGQALFQS
TIYEPALGFFSSMGTPFGIIETFTLAPTKCPYLDGLKISACLMEQVIQNYRKIVALIQNKLNDADFQNIAYLNGINEEIK
TLKGSVDLNALIEVAILNAENHLNYIENLERKADLWEEQLKLERETTARNIASSKVIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cagI YP_005774531.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-148 97
cagI YP_005777281.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-146 97
cagI YP_005775740.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-147 97
HP0540 BAD13873.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-147 97
cagI YP_003728724.1 cag pathogenicity island protein I Virulence cag PAI Protein 1e-147 97
cag19 AAR03963.1 Cag19 Virulence cag PAI Protein 8e-148 97
HP0540 NP_207336.1 cag pathogenicity island protein (cag19) Virulence cag PAI Protein 8e-148 97
HP0540 BAD14038.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-148 97
HP0540 BAD13956.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-148 97
cag19 AAR03874.1 Cag19 Virulence cag PAI Protein 3e-147 96
HP0540 BAD14065.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-145 96
cagI NP_223206.1 cag island protein Virulence cag PAI Protein 1e-146 96
HP0540 BAD13792.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-147 96
cagI AGC69802.1 cag pathogenicity island protein I Virulence cag PAI Protein 3e-147 96
HP0540 BAD13928.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-146 96
cagI YP_005779053.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-147 96
cagI AAF80208.1 CagI Virulence cag PAI Protein 3e-147 96
HP0540 BAD13819.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-146 96
HP0540 BAD13846.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-146 96
cag19 AAR03902.1 Cag19 Virulence cag PAI Protein 1e-146 96
HP0540 BAD13901.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-146 96
cag19 AAR03932.1 Cag19 Virulence cag PAI Protein 8e-147 96
HP0540 BAD14011.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-146 95
HP0540 BAD13983.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-142 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPV225_0544 YP_005763475.1 cag pathogenicity island protein (cagI) VFG0299 Protein 3e-148 97