|
Name : HPV225_0543 (HPV225_0543) Accession : YP_005763474.1 Strain : Helicobacter pylori v225d Genome accession: NC_017355 Putative virulence/resistance : Virulence Product : cag pathogenicity island protein Function : - COG functional category : - COG ID : - EC number : - Position : 521125 - 521832 bp Length : 708 bp Strand : - Note : - DNA sequence : ATGAAAACACTCGTGAAAAATACCATATCTTCTTTTTTGCTATTGTCTGTTTTGATGGCAGAAGATATAACAAGCGGCTT AAAGCAACTTGATAAAACCTACAACGAGACCAACCAACAAGTGCTCAAAAACTTAGATGAGATTTTTTCAACCACTAGCC CTAGCACTAATATAGGTAAAGAAGATGCTTTAAACATCAAAAAAGCGGCCATTGCTTTGAGGGGAGATTTAGCGTTATTG AAAGCCAATTTTGAAGCAAATGAGTTATTTTTCATCTCAGAAGATGTGATTTTCAAGACTTATATGTCTAGCCCTGAACT TTTATTAACCTATATGAAAATCAATCCCTTAGACCAAAACACTGCTGATCAGCAATGCGGAATATCCGATAAAGTTTTAG TTCTTTATTGTGAGGGGAAGCTGAAAATCGAGCAAGAAAAACAAAATATAAGAGAGCGTTTAGAAACTTCTCTAAAGGCG TATCAGAGCAACATTGGAGGCACAGCTTCCTTAATCACTGCTTCACAGACGCTTGTAGAAAGCCTAAAGAATAAAAATTT CATCAAAGGAATCAGAAAGCTTATGTTAGCTCACAACAAGGTCTTTTTAAATTATTTAGAGAAGTTGGACGCATTAGAAA TATCCCTAGAACAAAGTAAGCGACAATACCTACAAGAAAGGCAATCAAGTAAGATCATTGTTAAATGA Protein sequence : MKTLVKNTISSFLLLSVLMAEDITSGLKQLDKTYNETNQQVLKNLDEIFSTTSPSTNIGKEDALNIKKAAIALRGDLALL KANFEANELFFISEDVIFKTYMSSPELLLTYMKINPLDQNTADQQCGISDKVLVLYCEGKLKIEQEKQNIRERLETSLKA YQSNIGGTASLITASQTLVESLKNKNFIKGIRKLMLAHNKVFLNYLEKLDALEISLEQSKRQYLQERQSSKIIVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HP0539 | BAD14010.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 7e-101 | 97 |
| cagL | YP_005775739.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 8e-101 | 97 |
| HP0539 | BAD13872.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 5e-101 | 97 |
| cagL | YP_005774532.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 7e-101 | 97 |
| HP0539 | BAD13818.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 5e-101 | 97 |
| cagL | YP_005777280.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 7e-101 | 97 |
| cagL | AGC69801.1 | cag pathogenicity island protein L | Virulence | cag PAI | Protein | 4e-100 | 97 |
| HP0539 | BAD13845.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-100 | 96 |
| cag18 | AAR03931.1 | Cag18 | Virulence | cag PAI | Protein | 1e-98 | 96 |
| HP0539 | NP_207335.1 | cag pathogenicity island protein (cag18) | Virulence | cag PAI | Protein | 4e-99 | 96 |
| HP0539 | BAD13955.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 8e-101 | 96 |
| cagL | YP_003728725.1 | cag pathogenicity island protein L | Virulence | cag PAI | Protein | 6e-100 | 96 |
| cagL | AAC44697.1 | CagL | Virulence | cag PAI | Protein | 3e-99 | 96 |
| cagL | YP_005779054.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 8e-101 | 96 |
| HP0539 | BAD13791.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 6e-101 | 96 |
| cag18 | AAR03873.1 | Cag18 | Virulence | cag PAI | Protein | 2e-99 | 96 |
| HP0539 | BAD14037.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-99 | 96 |
| HP0539 | BAD13982.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-99 | 96 |
| HP0539 | BAD14064.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-101 | 96 |
| HP0539 | BAD13900.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 3e-100 | 95 |
| cag18 | AAR03901.1 | Cag18 | Virulence | cag PAI | Protein | 3e-98 | 95 |
| cagL | NP_223205.1 | cag island protein | Virulence | cag PAI | Protein | 4e-98 | 95 |
| cag18 | AAR03962.1 | Cag18 | Virulence | cag PAI | Protein | 9e-99 | 95 |
| HP0539 | BAD13927.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-97 | 95 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPV225_0543 | YP_005763474.1 | cag pathogenicity island protein | VFG0298 | Protein | 1e-99 | 96 |
