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Name : cagA (HPV225_0538) Accession : - Strain : Helicobacter pylori v225d Genome accession: NC_017355 Putative virulence/resistance : Virulence Product : - Function : - COG functional category : - COG ID : - EC number : - Position : 514961 - 517810 bp Length : 2850 bp Strand : + Note : Cag pathogenicity island protein A DNA sequence : ATGAAAAATTCATGGGCGTTTTTGGATGAATCTTTGGATGAATCTTTGGATGAATCTTTGGATGAATCTTTGGATGAATC TTTGGATGAATCTTTGGATGAATCTTTGGATGAATCTTTGGATGAATCTTTGGATGAATCTTTGGATGAATCTTTGGATG AATCTTTGGATGAATCTTTGGATGAATCTTTGGATGAATCTTTGGATGAATCTTTGGATGAATCTTTGAAAGAGAGGCAA GAAGCACAAAACAATGGAGAGCCTGTTGGGGATTGGCTTGATATTTTTTTATCGTTTGTATTTAACAAAGAACAATCTTC TGATCTCAAAGAAACGCTCAATCAAGAGCCAAGGCCTCATGTTGAACAAAATGTAGCCTCTACCCCCACCCACATACAAG GCTTACCGCCTGAAGCTAGGGATTTGCTTGATGAAAGGGGTGATTTTTCTAAATTCACTCTTGGTGATATGGAAATGTTG GATTACAAGTTCAACCAGTTACCGATTCACAATAACGCTCTGTCTTCTATGCTAATGGGGAGTCATAGCAGCATAGAACC TGAAAAAGTTTCATTGTTGTATGGGGATAATGGTGGTCCTGAAGCTAGGCATGATTGGAACGCCACCGTTGGTTATAAAA ACCAACAAGGCAACAATGTGGCCACACTCATCAATGCGCATCTTAAAAACGGCAGCGGGTTAGTCATAGCGGGTAATGGA AATGGGATTAACAACCCTAGCTTCTATCTCTACAAAACAGACCAACTCACAGGCTTGGAACAAGCGTTGAGTCAAGAAGA GATCCAAAACAAAGTGGATTTCATGGAACTTCTTGCACAAAACAACGCTAGATTAGATAACTTGAGCGAGGAAGAGAAAG AAAAGTTCCAAACTGAGATTGGAAATTTCCAAAAAGACCCTAAGGCTTATTTAGACTCCCTAGGGAATGATCGCATTGCT TTTGTTTCTAAAAAAGACCAAAAGCATTTAGCTTTGGTTACTGAGTTTGGTAATGGGGAATTGAGCTATACTCTCAAAGA TTATGGGAAAAAACAAGATAGAGCTTTAGATAGGGAGACAAAAACCACTCTTCAAGGTAACCTAAAGCATGATGGCGTGA TGTTTGTCAATTATTCCAATTTCAAATACACCAACGCCTCCAAGAGTCCTGATGAGGGTATAGGCGCTACGAATGGCGTT TCCCATTTGGAAGCAAATTTTAGCAAGGTGGCTGTCTTTAATTTGCCTGATTTAAATGGTCTCGCTATCTCTAGTTTTGC AAGGCGGAATTTAGAGGATAAACTGATCGCTAAAGGATTGCCCCCAAAAGACGCTAATAAGATCATCAAAGACTTTTTGA ACAGCAACAAGGAATTGCTTGAAAAAGCTTTAGACTTCAATAAAGCTGTAGCTGAAGCTAAAAATACAGGCAATTATGAC GGAGTGAAAAAAGCTCAAAAAGATCTTGAAAAATCTATAAGGAAACGAGAGCGTTTAGAGCAAGAAATAACGAAAAAATT TGAGAACAAGAGCGGCAACAAAAATAAAATGGAAGCGAAAGTTCAAGCTAACAGCCAAAAAGATGGGATTTTTAAGCTTA TCAATGAAGAGGCTCATAAGGAAGCAAGAATCGCCGCTTACGCTCAGAATCTTAAAGGCATCAGGAGGGAATTGTTTGAT AAAGTTAAAAATCTCAACAAGAATTTGAAAGACTTTGATAAATCTTTTGATGCGCTCAAAAGTGGCAAAAATAAGGATTT CAGCAAGGCAGAAGAAACGCTAAAAGCCCTTGAAAGCTCGGTGAAAGATTTGGGTATCAATCCAGAATGGATTTCAAAAG TTGAAAACCTTAATGCAGCTTTGAATGAATTCAAAAATGGCAAAAATAAGGATTTCAGCAAGGTAACACAAGCAAAAAGC GACCTTGAAAATTCCATTAAGGATGTGCTCATCAATCAAGAGATAACGGATAAAGTTGACAATCTCAATCAGGCTGTATT AAGGGCTAAAGCGATAGGCGATTTTAGTGGGGTAGAGCAAGAGCTAGCCAAACTCAAAAGCTTCTCAACGGATCAAAAAT TGGATCAAAAAAATGAAAGTTTCAATTATGCTACGATTGATGATCTCGGCGGATCTTCCCCTTTGAAAAGGTATGCTAAA GTTGATGATCTCAGTAAGGTAGGGCAATCAGATAGCCCTGAACCCATTTACGCTAATCTCGGCGGATCTTCCCCTTTGAA AAGGTATGCTAAAGTTGATGATCTCAGTAAGGTAGGGCTTTCAAGGGAGCAAGAATTGAATGAGAAAATTGGCAATCTCA ATCAGGCAGTGTCAGAAGCTAAAGCAGGTTCTTTTGGCAACCTAGAACAAATGATGGATGGACTCAAAGATTCTACAAAA AAGAATGTTGTGAATCTATGGTTTGAAGGTGCAAGAAAAGTGCCTATTAGTTTGCCTAGTTCGCAAGCGAAATTGGACAA TTACGCTACTAACAGCCACACACGCATTAATAGCAATGTCAAAAATGGAACAATCAATGAAAAAGCGATCGGCATGCTAA CGCAAAAAAACCCTGAGTGGCTCAAGCTTGTGAATGATAAGATAGTTGCGCATAATGTGGGAAGCGCTCCTTTGTCAGGT TATGATAAAATTGGATTCAACCAAAAGAATATGAAAGGTTATTCTGATTCGTTCAGGTTTTCCACCAAGTTGAGCAATGC CGTAAAAAACATTAAGTCTGACTTTAAGCAACTTTTAACCGATTGCATTTCTGCAGGAACTTACAGCCCGAAGAAAGCGG AACATGGAGTTAAAAATATTAATACAAAAAGTGGTTTCCAGAAATCTTAA Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cagA | BAD51762.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 91.9 |
| cagA | BAC10421.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 91.1 |
| HP0547 | BAD13799.1 | cag pathogenicity island protein | Virulence | cag PAI | DNA | 0.0 | 91.1 |
| cagA | NP_223213.1 | cag island protein, cytotoxicity associated immunodominant antigen | Virulence | cag PAI | DNA | 0.0 | 90.6 |
| cagA | BAD51766.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 90.6 |
| cagA | BAD51759.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 90.6 |
| cagA | BAD51751.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 90.6 |
| cagA | BAD51756.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 90.5 |
| cagA | BAD51753.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 90.1 |
| cagA | YP_003728762.1 | cytotoxin-associated protein A | Virulence | cag PAI | DNA | 0.0 | 89.7 |
| cagA | AGC69806.1 | cag pathogenicity island protein A | Virulence | cag PAI | DNA | 0.0 | 89.6 |
| cagA | AAR03970.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 89.2 |
