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Name : HPV225_0537 (HPV225_0537) Accession : - Strain : Helicobacter pylori v225d Genome accession: NC_017355 Putative virulence/resistance : Virulence Product : - Function : - COG functional category : - COG ID : - EC number : - Position : 514411 - 517810 bp Length : 3400 bp Strand : + Note : Cytotoxicity-associated immunodominant antigen DNA sequence : ATGGCTAACGAAACCATCAATCAAACAAAAAAACCAGATCAAACACCAAGCCAAACGGCTTTTAATCCACAACAATTTAT CAATAATCTTCAAGTGGCTTTTATTAAACTTGATAGTGCTGTCGCTTCATTTGATCCCGATCAAAAACCAATCGTTGATA AGAACGATAGGGATAACAGGCAAGCTTTTAATGTAATCTCGCAATTAAGGGAAGAATACGCCAATAAAGCGATCAAAAAT CCCACCAAAAAGAATCAGTATTTTTCAGACTTTATCGATAAAAGCAATGATTTGATCAACAAAAACGATCTCATTGATAC AGATTCTTCCACAAAGAGCTTTGAAAAATTTGGGGCTCAGCGTTACCAAATTTTTATGAATTGGGTGTCCCATCAAAAAG ATCCGTCTAAAATCAACACCCAAAAAATCCGAGATTTTATGGAAAATATCATACAACCCCCTATCTCTGATGATAAAGAA AAAGCGGAGTTTTTGAGGTCTGCCAAACAATCTTTTGCAGGAATTATCATAGGGAACCAAACCCGATCGGATGAAAAATT CATGGGCGTTTTTGGATGAATCTTTGGATGAATCTTTGGATGAATCTTTGGATGAATCTTTGGATGAATCTTTGGATGAA TCTTTGGATGAATCTTTGGATGAATCTTTGGATGAATCTTTGGATGAATCTTTGGATGAATCTTTGGATGAATCTTTGGA TGAATCTTTGGATGAATCTTTGGATGAATCTTTGGATGAATCTTTGGATGAATCTTTGAAAGAGAGGCAAGAAGCACAAA ACAATGGAGAGCCTGTTGGGGATTGGCTTGATATTTTTTTATCGTTTGTATTTAACAAAGAACAATCTTCTGATCTCAAA GAAACGCTCAATCAAGAGCCAAGGCCTCATGTTGAACAAAATGTAGCCTCTACCCCCACCCACATACAAGGCTTACCGCC TGAAGCTAGGGATTTGCTTGATGAAAGGGGTGATTTTTCTAAATTCACTCTTGGTGATATGGAAATGTTGGATTACAAGT TCAACCAGTTACCGATTCACAATAACGCTCTGTCTTCTATGCTAATGGGGAGTCATAGCAGCATAGAACCTGAAAAAGTT TCATTGTTGTATGGGGATAATGGTGGTCCTGAAGCTAGGCATGATTGGAACGCCACCGTTGGTTATAAAAACCAACAAGG CAACAATGTGGCCACACTCATCAATGCGCATCTTAAAAACGGCAGCGGGTTAGTCATAGCGGGTAATGGAAATGGGATTA ACAACCCTAGCTTCTATCTCTACAAAACAGACCAACTCACAGGCTTGGAACAAGCGTTGAGTCAAGAAGAGATCCAAAAC AAAGTGGATTTCATGGAACTTCTTGCACAAAACAACGCTAGATTAGATAACTTGAGCGAGGAAGAGAAAGAAAAGTTCCA AACTGAGATTGGAAATTTCCAAAAAGACCCTAAGGCTTATTTAGACTCCCTAGGGAATGATCGCATTGCTTTTGTTTCTA AAAAAGACCAAAAGCATTTAGCTTTGGTTACTGAGTTTGGTAATGGGGAATTGAGCTATACTCTCAAAGATTATGGGAAA AAACAAGATAGAGCTTTAGATAGGGAGACAAAAACCACTCTTCAAGGTAACCTAAAGCATGATGGCGTGATGTTTGTCAA TTATTCCAATTTCAAATACACCAACGCCTCCAAGAGTCCTGATGAGGGTATAGGCGCTACGAATGGCGTTTCCCATTTGG AAGCAAATTTTAGCAAGGTGGCTGTCTTTAATTTGCCTGATTTAAATGGTCTCGCTATCTCTAGTTTTGCAAGGCGGAAT TTAGAGGATAAACTGATCGCTAAAGGATTGCCCCCAAAAGACGCTAATAAGATCATCAAAGACTTTTTGAACAGCAACAA GGAATTGCTTGAAAAAGCTTTAGACTTCAATAAAGCTGTAGCTGAAGCTAAAAATACAGGCAATTATGACGGAGTGAAAA AAGCTCAAAAAGATCTTGAAAAATCTATAAGGAAACGAGAGCGTTTAGAGCAAGAAATAACGAAAAAATTTGAGAACAAG AGCGGCAACAAAAATAAAATGGAAGCGAAAGTTCAAGCTAACAGCCAAAAAGATGGGATTTTTAAGCTTATCAATGAAGA GGCTCATAAGGAAGCAAGAATCGCCGCTTACGCTCAGAATCTTAAAGGCATCAGGAGGGAATTGTTTGATAAAGTTAAAA ATCTCAACAAGAATTTGAAAGACTTTGATAAATCTTTTGATGCGCTCAAAAGTGGCAAAAATAAGGATTTCAGCAAGGCA GAAGAAACGCTAAAAGCCCTTGAAAGCTCGGTGAAAGATTTGGGTATCAATCCAGAATGGATTTCAAAAGTTGAAAACCT TAATGCAGCTTTGAATGAATTCAAAAATGGCAAAAATAAGGATTTCAGCAAGGTAACACAAGCAAAAAGCGACCTTGAAA ATTCCATTAAGGATGTGCTCATCAATCAAGAGATAACGGATAAAGTTGACAATCTCAATCAGGCTGTATTAAGGGCTAAA GCGATAGGCGATTTTAGTGGGGTAGAGCAAGAGCTAGCCAAACTCAAAAGCTTCTCAACGGATCAAAAATTGGATCAAAA AAATGAAAGTTTCAATTATGCTACGATTGATGATCTCGGCGGATCTTCCCCTTTGAAAAGGTATGCTAAAGTTGATGATC TCAGTAAGGTAGGGCAATCAGATAGCCCTGAACCCATTTACGCTAATCTCGGCGGATCTTCCCCTTTGAAAAGGTATGCT AAAGTTGATGATCTCAGTAAGGTAGGGCTTTCAAGGGAGCAAGAATTGAATGAGAAAATTGGCAATCTCAATCAGGCAGT GTCAGAAGCTAAAGCAGGTTCTTTTGGCAACCTAGAACAAATGATGGATGGACTCAAAGATTCTACAAAAAAGAATGTTG TGAATCTATGGTTTGAAGGTGCAAGAAAAGTGCCTATTAGTTTGCCTAGTTCGCAAGCGAAATTGGACAATTACGCTACT AACAGCCACACACGCATTAATAGCAATGTCAAAAATGGAACAATCAATGAAAAAGCGATCGGCATGCTAACGCAAAAAAA CCCTGAGTGGCTCAAGCTTGTGAATGATAAGATAGTTGCGCATAATGTGGGAAGCGCTCCTTTGTCAGGTTATGATAAAA TTGGATTCAACCAAAAGAATATGAAAGGTTATTCTGATTCGTTCAGGTTTTCCACCAAGTTGAGCAATGCCGTAAAAAAC ATTAAGTCTGACTTTAAGCAACTTTTAACCGATTGCATTTCTGCAGGAACTTACAGCCCGAAGAAAGCGGAACATGGAGT TAAAAATATTAATACAAAAAGTGGTTTCCAGAAATCTTAA Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cagA | BAD51755.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 92.5 |
| cagA | BAC10431.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 92.4 |
| HP0547 | BAD13963.1 | cag pathogenicity island protein | Virulence | cag PAI | DNA | 0.0 | 92.4 |
| cagA | BAC10426.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 92.2 |
| cagA | BAD51749.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 92 |
| HP0547 | BAD14072.1 | cag pathogenicity island protein | Virulence | cag PAI | DNA | 0.0 | 92 |
| cagA | BAC10435.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 92 |
| cagA | YP_005777288.1 | cag pathogenicity island protein | Virulence | cag PAI | DNA | 0.0 | 91.9 |
| cagA | BAC10430.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 91.9 |
| cagA | BAD51762.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 91.8 |
| cagA | BAC10419.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 91.8 |
| cagA | BAC10433.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 91.8 |
| HP0547 | BAD14018.1 | cag pathogenicity island protein | Virulence | cag PAI | DNA | 0.0 | 91.8 |
| cagA | BAC10424.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 91.8 |
| cagA | YP_005775747.1 | cag pathogenicity island protein | Virulence | cag PAI | DNA | 0.0 | 91.7 |
| cagA | YP_005774524.1 | cag pathogenicity island protein | Virulence | cag PAI | DNA | 0.0 | 91.7 |
| HP0547 | BAD13880.1 | cag pathogenicity island protein | Virulence | cag PAI | DNA | 0.0 | 91.6 |
| cagA | AAF17597.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 91.6 |
| cagA | BAD51754.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 91.6 |
| cagA | BAD51752.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 91.6 |
| cagA | BAC10420.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 91.5 |
| cagA | BAC10423.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 91.5 |
| cagA | YP_005779046.1 | cag pathogenicity island protein | Virulence | cag PAI | DNA | 0.0 | 91.4 |
| cagA | BAC10427.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 91.4 |
| cagA | BAD51744.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 91.3 |
| HP0547 | BAD13826.1 | cag pathogenicity island protein | Virulence | cag PAI | DNA | 0.0 | 91.2 |
| cagA | BAC10422.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 91.2 |
| cagA | BAC10421.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 91.1 |
| HP0547 | BAD13799.1 | cag pathogenicity island protein | Virulence | cag PAI | DNA | 0.0 | 91.1 |
| HP0547 | BAD13853.1 | cag pathogenicity island protein | Virulence | cag PAI | DNA | 0.0 | 91.1 |
| cagA | BAD51764.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 90.9 |
| cagA | NP_223213.1 | cag island protein, cytotoxicity associated immunodominant antigen | Virulence | cag PAI | DNA | 0.0 | 90.8 |
| cagA | BAD51751.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 90.8 |
| cagA | BAD51759.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 90.7 |
| cagA | BAD51756.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 90.6 |
| cagA | BAD51758.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 90.6 |
| cagA | BAC10432.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 90.6 |
| HP0547 | BAD13990.1 | cag pathogenicity island protein | Virulence | cag PAI | DNA | 0.0 | 90.6 |
| cagA | BAD51766.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 90.5 |
| cagA | BAD51750.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 90.5 |
| cagA | BAD51760.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 90.4 |
| cagA | AAR03939.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 90.4 |
| cagA | AAF17598.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 90.4 |
| cagA | BAD51761.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 90.3 |
| cagA | BAD51753.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 90.2 |
| cagA | AAR03909.1 | CagA | Virulence | cag PAI | DNA | e-253 | 90.2 |
| cagA | YP_003728762.1 | cytotoxin-associated protein A | Virulence | cag PAI | DNA | 0.0 | 90 |
| cagA | AGC69806.1 | cag pathogenicity island protein A | Virulence | cag PAI | DNA | 0.0 | 90 |
| cagA | BAC10429.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 90 |
| HP0547 | BAD13935.1 | cag pathogenicity island protein | Virulence | cag PAI | DNA | 0.0 | 90 |
| cagA | AAC44706.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 89.8 |
| cagA | AAR03881.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 89.8 |
| HP0547 | BAD14045.1 | cag pathogenicity island protein | Virulence | cag PAI | DNA | e-242 | 89.6 |
| cagA | AAR03970.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 89.5 |
| HP0547 | NP_207343.1 | cag pathogenicity island protein (cag26) | Virulence | cag PAI | DNA | 0.0 | 89.5 |
| cagA | BAC10428.1 | CagA | Virulence | cag PAI | DNA | 0.0 | 89.5 |
| HP0547 | BAD13908.1 | cag pathogenicity island protein | Virulence | cag PAI | DNA | 0.0 | 89.5 |
| cagA | BAD51747.1 | cytotoxin associated protein A | Virulence | cag PAI | DNA | 0.0 | 89.2 |
