Gene Information

Name : HPV225_0521 (HPV225_0521)
Accession : YP_005763454.1
Strain : Helicobacter pylori v225d
Genome accession: NC_017355
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein (cagZ)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 499146 - 499571 bp
Length : 426 bp
Strand : -
Note : cag6

DNA sequence :
ATGCAAAAGAATTTTATTAGTTTTGATGCTTATTACAACTATTTGAACAACCTTGTGTTAGCCAGTTACAATCGTTGCAA
ACAAGAAAAGACTTTTGCAGAAAGCACGATCAAAAATGAACTAACGCTTGGGGAGTTTGTTGTAGAAATTTCTGACAACT
TCAATAATTTTATGTGTGATGAAGTGGCAAAAATTTCAGACCTAGTGGCTTCTTATCTGCCAAGAGAGTATTTACCGCCA
TTCATAGATGGCAATATGATGGGCGTGGCGTTTCAGATTCTAGGGATAGATGATTTTGGAAGGAAGCTCAATGAGATTGT
CCAAGATATAGGGACTAAATATATTATTTTGAGCAAAAATAAGACTTATCTCACTTCTTTAGAAAGAGCTAAATTGATAA
CCCAATTAAAATTAAATTTGGAATAA

Protein sequence :
MQKNFISFDAYYNYLNNLVLASYNRCKQEKTFAESTIKNELTLGEFVVEISDNFNNFMCDEVAKISDLVASYLPREYLPP
FIDGNMMGVAFQILGIDDFGRKLNEIVQDIGTKYIILSKNKTYLTSLERAKLITQLKLNLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0526 BAD13778.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-61 99
HP0526 BAD13969.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-61 99
HP0526 BAD13805.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-61 99
cagZ YP_005774543.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-60 99
cagZ YP_005779064.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-61 99
HP0526 BAD14051.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-61 99
cagZ YP_005777270.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-61 99
HP0526 BAD13832.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-61 99
cag6 AAR03860.1 Cag6 Virulence cag PAI Protein 1e-60 98
cag6 AAR03889.1 Cag6 Virulence cag PAI Protein 5e-60 98
cag-Z AAF80197.1 Cag-Z Virulence cag PAI Protein 5e-60 98
cagZ YP_003728738.1 cag pathogenicity island protein Z Virulence cag PAI Protein 3e-60 98
HP0526 BAD13942.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-60 98
cagZ YP_005775729.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-60 98
HP0526 BAD14025.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-60 98
HP0526 NP_207322.1 cag pathogenicity island protein (cag6) Virulence cag PAI Protein 1e-60 98
HP0526 BAD13859.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-60 98
HP0526 BAD13887.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-61 98
HP0526 BAD13997.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-60 98
orf12 NP_223193.1 cag island protein Virulence cag PAI Protein 1e-60 98
HP0526 BAD13914.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-61 98
cag6 AAR03918.1 Cag6 Virulence cag PAI Protein 1e-60 98
cag6 AAR03949.1 Cag6 Virulence cag PAI Protein 1e-60 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPV225_0521 YP_005763454.1 cag pathogenicity island protein (cagZ) VFG0286 Protein 4e-61 98