|
Name : HPV225_0245 (HPV225_0245) Accession : YP_005763189.1 Strain : Helicobacter pylori v225d Genome accession: NC_017355 Putative virulence/resistance : Resistance Product : sulfate permease Function : - COG functional category : - COG ID : - EC number : - Position : 225409 - 226566 bp Length : 1158 bp Strand : + Note : - DNA sequence : ATGTTTGAAAAGATACAAAAAGAATGGTTGAGTAACATTCAAAAGGATTTGTTGTCTGGTTTTGTGGTGGGGCTTTCTGT GATCCCAGAGACGGCCGGCTTTGCGATCATGGTGGGTTTAGATGTGGGCGTGGCGTTTTATACGACCTTTTACATGGCTT TTGTTTTGTCTTTTTTTGGGGCTAGAAAGGCGATGATTAGCGCAGCGGCCGGCTCAGTGGCGCTCATTTTAGTGGGCGTG GTTAAAAACTATGGGCTTGAATACGCGGGCGTGGCGACTCTTATGGCAGGGGTGTTGCAAATTCTTTTAGGCTATTTGAA AATAGGGAATCTTTTGAGGTTTATCCCTCAATCAGTGATGTATGGCTTTGTGAACGCGCTAGGCATTTTGCTTTTAATGG AACAATTCAAATTCCTTCAAAACCAAAATTTAGGGGTGTTTATCTTGCTTGTTATGGGGATATTGATCATTTACCTCTTC CCCTTAATCACTAAAAAAATCCCCTCTAATCTGGTTTGTATCCTTATAGTGAGCGCGATCGCTTTAATTTTTGATACGCA TGCGCCGAATTTAGGGAGCATTGAGCAAGGGATTTCAGGCTTTCATTCCATCATTATCCCAAAAAATTTGGATTTTAAAA TTTTGGTAGGATTGTTGCCTTACGCTCTTTCTTTAGCGTTAGTAGGCACGATAGAAAGTTTATTGACCGCCAAAACTTTA GATATGATTTTAAAAGACGGCGTGAGCGATAAAAATAAAGAAACTAAAGCGCAAGGCTTGGGGAATATCATCTCAGGGCT TTTGGGGGGAATGACAGGGTGCGCTTTAGTGGGGCAGTCTATCATCAACGCAAAATCCGGGGCCAAAACCAGGCTTTCTA CTTTTTTTGCCGGCTTTTCTTTAATGGTGTTAGTGCTAGTGTTTAATGAATATGTGGTTAAGATCCCCATTGTGGCGGTT GTGGCGGTGATGGTGATGATTTCTTTCACCACTTTTAATTTCCAATCCATTATTAACATTAAAAAAATCAAGCCCTATGA CACGCTGAACATGCTCTTAGTCGTGGCGGTGGTTTTATACACGCATAATTTAGCGATAGGGGTTGTGGTGGGGGTTTTAG TCAATGCGTTATGGATCAAATCAAAAGGGATTGCGTGA Protein sequence : MFEKIQKEWLSNIQKDLLSGFVVGLSVIPETAGFAIMVGLDVGVAFYTTFYMAFVLSFFGARKAMISAAAGSVALILVGV VKNYGLEYAGVATLMAGVLQILLGYLKIGNLLRFIPQSVMYGFVNALGILLLMEQFKFLQNQNLGVFILLVMGILIIYLF PLITKKIPSNLVCILIVSAIALIFDTHAPNLGSIEQGISGFHSIIIPKNLDFKILVGLLPYALSLALVGTIESLLTAKTL DMILKDGVSDKNKETKAQGLGNIISGLLGGMTGCALVGQSIINAKSGAKTRLSTFFAGFSLMVLVLVFNEYVVKIPIVAV VAVMVMISFTTFNFQSIINIKKIKPYDTLNMLLVVAVVLYTHNLAIGVVVGVLVNALWIKSKGIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ACICU_00239 | YP_001844898.1 | MFS superfamily sulfate permease | Not tested | AbaR20 | Protein | 1e-57 | 48 |
| sup | ACN81033.1 | sulphate permease | Not tested | AbaR5 | Protein | 1e-57 | 48 |
| sulI | CAJ77098.1 | sulfate permease | Not tested | AbaR1 | Protein | 9e-58 | 48 |
| sup | AGK36657.1 | sulphate permease | Not tested | AbaR26 | Protein | 9e-58 | 48 |
| sup | AFV47947.1 | sulphate premease Sup | Not tested | AbaR25 | Protein | 2e-60 | 46 |
| ABZJ_00239 | YP_005524195.1 | sul1delta fusion protein | Not tested | AbaR22 | Protein | 3e-60 | 46 |
| sup | AFV47978.1 | sulphate premease Sup | Not tested | delta-AbaR25 | Protein | 2e-60 | 46 |
| ABZJ_00258 | YP_005524214.1 | sul1delta fusion protein | Not tested | AbaR22 | Protein | 3e-60 | 46 |
| ABTW07_3910 | YP_005797158.1 | sul1delta fusion protein | Not tested | AbaR4e | Protein | 3e-60 | 46 |
| sup | AEQ20903.1 | sulphate permease | Not tested | Tn6166 | Protein | 3e-60 | 46 |
| ABK1_0240 | YP_005512812.1 | Sul1delta fusion protein | Not tested | AbaR4d | Protein | 3e-60 | 46 |
| sup | AEZ06030.1 | sulphate permease | Not tested | Tn6167 | Protein | 3e-60 | 46 |
| BJAB07104_00259 | YP_008207724.1 | Sulfate permease and related transporters (MFS superfamily) | Not tested | AbaR25 | Protein | 3e-60 | 46 |
| BJAB07104_00275 | YP_008207740.1 | Sulfate permease and related transporters (MFS superfamily) | Not tested | AbaR25 | Protein | 3e-60 | 46 |
| BJAB0868_00263 | YP_008211589.1 | Sulfate permease and related transporters (MFS superfamily) | Not tested | AbaR26 | Protein | 3e-60 | 46 |
| sup | AFH57200.1 | sulfate permease | Not tested | AbaR4a | Protein | 2e-60 | 46 |
| BJAB0868_00279 | YP_008211605.1 | Sulfate permease and related transporters (MFS superfamily) | Not tested | AbaR26 | Protein | 3e-60 | 46 |
| unnamed | AEO37462.1 | Sup* | Not tested | AbaR4 | Protein | 8e-57 | 46 |
| ABTW07_3869 | YP_005797117.1 | sulfate permease | Not tested | AbaR4e | Protein | 2e-56 | 46 |
