|
Name : HPV225_1593 (HPV225_1593) Accession : YP_005764458.1 Strain : Helicobacter pylori v225d Genome accession: NC_017355 Putative virulence/resistance : Virulence Product : toxR activated protein Function : - COG functional category : - COG ID : - EC number : - Position : 1551639 - 1552334 bp Length : 696 bp Strand : + Note : - DNA sequence : TTGCAAATGGATGAATTTTTAGACGATTTGCAACTTTCAGGGGAGCGCATCAACGATTTAGAAGAAGTGGTGGGAGTGAA TAGACCTGAAGAAAAAGAAGAGGGCAATTTTTCCAGCCGCTTAGATGTCGCTGGGATTACCGGGCTTCAAAAAAGCTTTA TCATGCGCCTTATCCCTAATGACTACCCGCTAGAATCCTATCGGCGCGTTTCAGCCGCCTTTAATAAAAGAATCCACCCT ATTTTGCATGTGTTGCACAACCATACTGGGCTTGATCTAAGCACCGCTATCAACACCCCTGTGTATGCGAGCGCAAGCGG GGTAGTGGGGTTAGCGAGCAAGGGGTGGAATGGGGGGTATGGGAATTTGATTAAAGTTTTCCACCCTTTTGGTTTTAAAA CCTACTACGCCCATTTGAATAAAATCATCGTAAAAACGGGCGAATTTGTCAAAAAAGGGCAGTTGATTGGATATAGTGGT AATACAGGGATGAGCACAGGGCCGCATTTGCATTATGAAGTGCGGTTTTTAAATCAGCCCATAAACCCCATGAGTTTCAC CAAGTGGAACATGAAAAATTTTGAAGAAGTTTTCAATAAAGAAAGGAGCATCAGATGGCAATCTTTGATAACAATAATAA ATCAGCTAATGCAAAAACAGGACCAGCGACTATCATCGCTCAAGGCACAAAAATAA Protein sequence : MQMDEFLDDLQLSGERINDLEEVVGVNRPEEKEEGNFSSRLDVAGITGLQKSFIMRLIPNDYPLESYRRVSAAFNKRIHP ILHVLHNHTGLDLSTAINTPVYASASGVVGLASKGWNGGYGNLIKVFHPFGFKTYYAHLNKIIVKTGEFVKKGQLIGYSG NTGMSTGPHLHYEVRFLNQPINPMSFTKWNMKNFEEVFNKERSIRWQSLITIINQLMQKQDQRLSSLKAQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tagE | ACK75656.1 | TagE protein | Virulence | VPI | Protein | 1e-35 | 41 |
| tagE | ACK75650.1 | TagE protein | Virulence | VPI | Protein | 1e-35 | 41 |
| tagE | ACK75653.1 | TagE protein | Virulence | VPI | Protein | 9e-36 | 41 |
| tagE | ACK75644.1 | TagE protein | Virulence | VPI | Protein | 7e-36 | 41 |
| tagE | ACK75662.1 | TagE protein | Virulence | VPI | Protein | 7e-36 | 41 |
| tagE | ACK75668.1 | TagE protein | Virulence | VPI | Protein | 7e-36 | 41 |
| tagE | ACK75659.1 | TagE protein | Virulence | VPI | Protein | 5e-36 | 41 |
| tagE | ACK75665.1 | TagE protein | Virulence | VPI | Protein | 2e-35 | 41 |
