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Name : HPKB_0943 (HPKB_0943) Accession : YP_005762438.1 Strain : Helicobacter pylori 52 Genome accession: NC_017354 Putative virulence/resistance : Unknown Product : phosphoglycerate mutase Function : - COG functional category : - COG ID : - EC number : - Position : 1000644 - 1002119 bp Length : 1476 bp Strand : + Note : Consensus COG by CONSORF: COG0696 DNA sequence : ATGGCGCAAAAAACTCTTTTGATCATCACTGATGGCATCGGGTATCGTAAAGATAGCGATCATAACGCATTCTTTCATGC TAAAAAACCCACTTATGATTTGATGTTTAAAACCTTGCCTTATAGCCTGATTGATACGCATGGCTTGAGCGTGGGCTTAC CTAAGGGGCAAATGGGAAATTCTGAAGTGGGGCATATGTGTATTGGGGCTGGTAGGGTGCTGTATCAGGATTTAGTTAAA ATTTCTTTAAGCCTTCAAAACGATGAATTAAAAAACAACCCCGCTTTTTTAAACACGATCCACAAAAGCAAGGTGGTGCA TCTTATGGGTTTAATGAGCGATGGAGGCGTGCATTCACACATTGAGCATTTTATCGCTCTAGCTTTAGAGTGTGAAAAAT CCCATAAAAAAGTCTGTCTGCATTTAATCACCGATGGGCGCGATGTCGCTCCTAAAAGCGCTTTAACTTATTTAAAACAA ATGCAAAATATCTGCAATGAAAACATTCAAATCGCTACCATAAGCGGTCGTTTTTATGCCATGGATAGGGATAATCGCTT TGAAAGGATTGAGCTTGCGTATCATAGCTTAATGGGGCTTAATCACACGCCTTTAAGCCCTAGCGAGTATATCCAAAGCC AGTATGATAAAAATACCACCGATGAATTTATCATGCCCGCTTGTTTTAAAAATTATTACGGCATGCAAGATGATGAAAGT TTTATTTTTATCAATTTCAGGAATGATAGGGCTAGAGAAATCGTGAGCGCTTTAGGCCAAAAACAATTCAATGGCTTTAA GCGCGAAACTTTTAAAAAACTCCATATCGCTACCATGACGCCTTATGATAACACTTTCCCCTACCCTGTTTTATTCCCCA AAGAAAGCGTTCAAAACACGCTCGCTGAAGTGGTCTCTCAACACAACCTGACCCAAAGCCATATCGCTGAAACTGAAAAA TACGCGCATGTAACCTTTTTCATCAATGGCGGGGTGGAAGCGCCTTTTAAAAATGAAAACCGGGTGCTTATCCAAAGCCC AAAAGTAACCACTTATGACTTAAAGCCTGAAATGAGCGCTAAAGAAGTAACCCTTGCGGTGTTAGAGCAAATGGAATCAG GCACGGATTTGATCATTGTGAATTTTGCTAATGGCGATATGGTGGGGCATACGGGGAATTTTGAAGCGAGCATCAAAGCG GTAGAAGCGGTGGATGCATGCTTAGGGGAAATCCTTTCACTGGCTAAAAAATTGGATTACGCCATGCTTTTAACCAGCGA TCATGGCAATTGCGAACGCATGAAAGATGAAAATCAAAACCCCTTAACAAACCACACCGCCGGGAGCGTGTATTGCTTTG TTTTAGGGAATGGAGTTAGATCCATTAAAAACGGAGCCTTAAACAATATCGCTAGTAGCGTGTTAAAACTCATGGGCCTT AAAGCCCCAGCAACGATGGACGAACCCCTATTTTAA Protein sequence : MAQKTLLIITDGIGYRKDSDHNAFFHAKKPTYDLMFKTLPYSLIDTHGLSVGLPKGQMGNSEVGHMCIGAGRVLYQDLVK ISLSLQNDELKNNPAFLNTIHKSKVVHLMGLMSDGGVHSHIEHFIALALECEKSHKKVCLHLITDGRDVAPKSALTYLKQ MQNICNENIQIATISGRFYAMDRDNRFERIELAYHSLMGLNHTPLSPSEYIQSQYDKNTTDEFIMPACFKNYYGMQDDES FIFINFRNDRAREIVSALGQKQFNGFKRETFKKLHIATMTPYDNTFPYPVLFPKESVQNTLAEVVSQHNLTQSHIAETEK YAHVTFFINGGVEAPFKNENRVLIQSPKVTTYDLKPEMSAKEVTLAVLEQMESGTDLIIVNFANGDMVGHTGNFEASIKA VEAVDACLGEILSLAKKLDYAMLLTSDHGNCERMKDENQNPLTNHTAGSVYCFVLGNGVRSIKNGALNNIASSVLKLMGL KAPATMDEPLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00298 | YP_008207763.1 | Phosphoglyceromutase | Not tested | AbaR25 | Protein | 6e-91 | 45 |
| BJAB0868_00302 | YP_008211628.1 | Phosphoglyceromutase | Not tested | AbaR26 | Protein | 6e-91 | 45 |
