|
Name : HPKB_0828 (HPKB_0828) Accession : YP_005762336.1 Strain : Helicobacter pylori 52 Genome accession: NC_017354 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 873003 - 875093 bp Length : 2091 bp Strand : - Note : Candidate starts by CONSORF: 875129,875102,875096,875093 DNA sequence : ATGAAAGCAGACGCTATGAAACTGCTAGACTTTATCGGCAAGAGTCAAGAAAAACAATTTGTCATTCCCATCTATCAGAG GGTGTATAGCTGGGAAAAGGAGCAATGCAAGCAGTTGTGGGATGATATTATCAAAACGGGTGGAAACGATCAAATGAACG GGCATTTTATTGGCTCTATCGTATTTGTGCAAGATGGCATATACACCACTAGCCACAACGAGCTCCTCATAATTGATGGC CAACAAAGGCTCACCACTATCACGCTTTTATTCATCGCTTTGAGAGATCATTTGAACGATGAAGATGAATTTTTAGAAAA ATTTTCGCACCAAAAAATCCAGAATCGCTACCTCATTAACAGCGATGAGAAAGGCGATAAAAAATTCAAACTCATCCTCT CAGAGCCTGATAGAGATATCTTGTTATCTTTGATTGATAAAAACAGAAGAAAACCGAGCGAGCTTTCGTCAAAAATAATG GAAAATTTTAAATTATTTGAAGAATGGATCCGTAAAAACACCGACAAACTAGAAACCATTTTTAAAGGATTAGACAAACT CATGGTGGTTGAAATCTCTTTAGAGAGAGGTAAGGACAACCCCCAGCTCATCTTTGAGAGCATGAACTCAACGGGCAAGG ATCTCACGCAAACGGATTTGATCAGAAACTACATTTTAATGGGATTAGAGCCTGAAAAACAAAAGATTTTTTATGAGAAG TATTGGAGGGCTATGGAGGAAGATTTTAAACAAGATGAAACATTGTTTAATCAATTTATCCGGCATTATCTCACGATTAA AACAAGAGAAATCCCTAATATCAATAAGGTTTATGTAGCTCTCAAGGATTACCAGCAAAAAGAGGGGATAGGAATAGAGG ATTTATTAAAAGATTTACAAAAATATTGCGGGTATTTTTGCCAAATCGTATTCAAAAAAAAAGAAGCCTATAAAGATTTA AACAAGGCTTTAAGTTTTTTGGTGGATTTAGAGATGGATGTGATCTATCCGCTACTACTAGAGCTTTATAGCGATTATAG CGATAGCGTTTTATCCAAGCAGGATTTTATCCCTATTATCGATTTGATAGAGAGTTATATTTGCAGAAGGGCGGTGTGCG GGCTTGGCACAAATAGTCTCAATAAAGTCTTTCTCTCTTTTACAAAGCACATCCAAAAAGATGAATATTTTGAAAGCCTA AAGGCGCATTTTGGTTATCTGACAGAAAAACAAAGATTTCCAAACAATGACGAGTTTAAAAAGCTTTTTATTACGATAGA TTTTTATAATTTTAAAAAAAATAAATACTTTTTTGAAAGGCTAGAAAATTTTGACAGAAAAGAGCGAGTTTATACCCATG AATACACTAAAGAACACATCATGCCTCAAACACTAGAAGAAGAATGGGAAAAGGATTTGGGTGAAAATTTTCAAGAGATA CACGATAAATACCTCCACACAATAGGCAATCTCACTCTGACAGGCTATAACGGTAAATACAGCAACAAATCTTTTCAAGA AAAACAAGGCATGGAGAAGGGCTTCAAACAAAGCCCATTGAAACTCAATCAAAGTTTAAAAAATTTAGAATCTTTTGGCG AAGAAGAGATCAAAAAAAGAGCTAATGATTTAGCGGATTTGGCTTTAAAGATTTGGACTTATCCAAAGCTAGATGCAGAA ACGCTAGAGAAATATAAACCCAAGAAAGACAAGAAAGAAAAAAAGGTTTATGATTTAAGCTCTTATAAGTTTGGCTCTCA TTCAAGGGAATTATTTGATATTTTAAACAAAGAGATCAAAGCCCTTGATGAAAAGATCGTTGAAAATTTTAATCAAGATT ATATCTCTTATAAGTTTGATAAAAATTTTGTGGATATTGTTGTGCAAACAAGAGACTTAAAATTGTATTTGAATATGAAA TTCAATGAATTGCAAGATGAAAAAAATTTAGCAAGGGATATGACTAATAAAGGTCATTTAGGGAATGGGGACATAGAAGT GAAGCTAGAAACAAAAGAGAATATCCCTTATTGTTTGGGGTTGATCAAACAGGCTTTAGAAAAACAGATGGGTGGTAGGA ACAGGCAATAA Protein sequence : MKADAMKLLDFIGKSQEKQFVIPIYQRVYSWEKEQCKQLWDDIIKTGGNDQMNGHFIGSIVFVQDGIYTTSHNELLIIDG QQRLTTITLLFIALRDHLNDEDEFLEKFSHQKIQNRYLINSDEKGDKKFKLILSEPDRDILLSLIDKNRRKPSELSSKIM ENFKLFEEWIRKNTDKLETIFKGLDKLMVVEISLERGKDNPQLIFESMNSTGKDLTQTDLIRNYILMGLEPEKQKIFYEK YWRAMEEDFKQDETLFNQFIRHYLTIKTREIPNINKVYVALKDYQQKEGIGIEDLLKDLQKYCGYFCQIVFKKKEAYKDL NKALSFLVDLEMDVIYPLLLELYSDYSDSVLSKQDFIPIIDLIESYICRRAVCGLGTNSLNKVFLSFTKHIQKDEYFESL KAHFGYLTEKQRFPNNDEFKKLFITIDFYNFKKNKYFFERLENFDRKERVYTHEYTKEHIMPQTLEEEWEKDLGENFQEI HDKYLHTIGNLTLTGYNGKYSNKSFQEKQGMEKGFKQSPLKLNQSLKNLESFGEEEIKKRANDLADLALKIWTYPKLDAE TLEKYKPKKDKKEKKVYDLSSYKFGSHSRELFDILNKEIKALDEKIVENFNQDYISYKFDKNFVDIVVQTRDLKLYLNMK FNELQDEKNLARDMTNKGHLGNGDIEVKLETKENIPYCLGLIKQALEKQMGGRNRQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPB8_729 | YP_003728750.1 | hypothetical protein | Not tested | cag PAI | Protein | 0.0 | 80 |
