|
Name : HPKB_0794 (HPKB_0794) Accession : YP_005762302.1 Strain : Helicobacter pylori 52 Genome accession: NC_017354 Putative virulence/resistance : Unknown Product : glutamate racemase Function : - COG functional category : - COG ID : - EC number : - Position : 829740 - 830507 bp Length : 768 bp Strand : + Note : Consensus COG by CONSORF: COG0796 DNA sequence : ATGAAAATAGGCGTTTTTGATAGCGGTGTGGGAGGGTTTAGCGTTTTAAAAAGCCTTTTAAAAGCGCAATTGTTTGATGA AATCATCTATTATGGCGATAGCGCTAGAGTGCCTTATGGCACTAAAGACCCCACCACGATCAAGCAATTTGGCTTAGAGG CTTTGGATTTTTTCAAACCGCACAAGATTGAATTATTGATTGTGGCATGCAACACAGCGAGCGCTCTAGCTTTAGAAGAG ATGCAAAAGCATTCCAAAATCCCTATTGTGGGCGTGATTGAGCCAAGCATTTTAGCGATCAAACAACAAGTAAAAGATAA AAACGCCCCTATTTTAGTGCTAGGGACAAAAGCGACGATTCAATCCAACGCTTATGACAACGCCCTGAAACAACAAGACT ATTTGAATGTTTCGCATTTAGCCACTTCTCTTTTTGTGCCTTTGATTGAAGAAAATATTTTAGAGGGCGAATTATTAGAA ACTTGCATGCGTTATTATTTCACTCCATTAGAGATCTTGCCTGAAGTGGTTATTTTAGGTTGCACGCATTTTCCCTTGAT CGCTCACCAAATTGAGGGCTATTTTATGGAGCATTTTACCCTTTCAACGCCCCCCCTACTCATCCATTCTGGCGATGCTA TTGTGGAATATTTGCACCAAAAATACGCCCTTAAGAAAAACGCATGCGCATTCCCTAAAGTGGAATTTCATGCGAGCGGC GATGTGATCTGGCTAGAAAAACAGGCTAAAGAATGGCTCAAGTTGTAA Protein sequence : MKIGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHKIELLIVACNTASALALEE MQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQDYLNVSHLATSLFVPLIEENILEGELLE TCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFTLSTPPLLIHSGDAIVEYLHQKYALKKNACAFPKVEFHASG DVIWLEKQAKEWLKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glr | AAR03882.1 | glutamate racemase | Not tested | cag PAI | Protein | 2e-101 | 98 |
| glr | AAR03910.1 | glutamate racemase | Not tested | cag PAI | Protein | 1e-99 | 97 |
| HP0549 | BAD13991.1 | - | Not tested | cag PAI | Protein | 1e-101 | 97 |
| HP0549 | BAD13881.1 | - | Not tested | cag PAI | Protein | 2e-98 | 97 |
| HP0549 | NP_207344.1 | glutamate racemase | Not tested | cag PAI | Protein | 2e-100 | 95 |
| glr | AAR03940.1 | glutamate racemase | Not tested | cag PAI | Protein | 8e-99 | 95 |
| glr | AAC44708.1 | Glr | Not tested | cag PAI | Protein | 2e-99 | 95 |
| glr | AAR03971.1 | glutamate racemase | Not tested | cag PAI | Protein | 6e-100 | 95 |
| murI | NP_223214.1 | glutamate racemase | Not tested | cag PAI | Protein | 8e-98 | 93 |
