Gene Information

Name : HPKB_0698 (HPKB_0698)
Accession : YP_005762208.1
Strain : Helicobacter pylori 52
Genome accession: NC_017354
Putative virulence/resistance : Virulence
Product : UDP-glucose pyrophosphorylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 724361 - 725182 bp
Length : 822 bp
Strand : -
Note : Consensus COG by CONSORF: COG1210

DNA sequence :
ATGATTAAAAAATGCCTTTTTCCTGCCGCTGGCTACGGCACGCGCTTTTTGCCGATCACTAAAACCATTCCTAAAGAAAT
GCTGCCCATTGTGGATAAGCCTTTAATCCAATACGCTGTAGAAGAAGCGATGGAAGCAGGCTGTGAAGTGATGGCGATTG
TTACAGGCAGAAACAAGCGCAGTTTAGAAGATTATTTTGACACGAGCTATGAAATAGAGCATCAAATCCAAGGCACTAAC
AAAGAAAACGCCCTAAAAAGCATTCGTAACATTATAGAAAAATGCTGTTTTTCCTATGTGCGCCAAAAGCAAATGAAAGG
CTTAGGGCATGCGATTTTAACCGGAGAAGCCCTCATAGGCAATGAGCCTTTTGCGGTGATTTTAGCCGATGACTTATGCA
TAAGCCATGATCACCCAAGCGTGCTAAAGCAAATGATTTCCTTGTATCAAAAATACCAATGCTCCATTGTAGCCATTGAA
GAGGTGGCGCTAGAAGAAGTTTCAAAATACGGCGTGATCAGGGGCGAATGGTTAGAAGATGGGGTGTATGAGATTAAAGA
CATGGTGGAAAAACCAAGCCAAGAAGACGCCCCAAGCAATCTAGCCGTGATAGGGCGCTACATTCTAACCCCGGATATTT
TTGAAATTTTAAGCGAGACGAAACCGGGTAAAAACAATGAAATCCAGATCACAGACGCCTTACTCACTCAAGCCAAAAGA
AAACGAATCATCGCCTACCAATTCAAAGGCAAACGATACGATTGCGGGAGCGTGGAAGGCTATATTGAAGCGAGTAACGC
TTATTATAAAAAACGCTTGTAA

Protein sequence :
MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTN
KENALKSIRNIIEKCCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMISLYQKYQCSIVAIE
EVALEEVSKYGVIRGEWLEDGVYEIKDMVEKPSQEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALLTQAKR
KRIIAYQFKGKRYDCGSVEGYIEASNAYYKKRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 3e-48 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPKB_0698 YP_005762208.1 UDP-glucose pyrophosphorylase VFG0964 Protein 2e-55 48