|
Name : scoA (HPKB_0656) Accession : YP_005762166.1 Strain : Helicobacter pylori 52 Genome accession: NC_017354 Putative virulence/resistance : Unknown Product : 3-oxoacid CoA-transferase subunit A Function : - COG functional category : - COG ID : - EC number : - Position : 676531 - 677229 bp Length : 699 bp Strand : - Note : Consensus COG by CONSORF: COG1788 DNA sequence : ATGAACAAGGTTATAACCGATTTAGACAAAGCATTGAGCGGGTTAAAAGATGGGGACACTATTCTAGTGGGCGGTTTTGG GCTGTGTGGGATACCCGAATACGCCATTGATTACATTTATAAGAAAGGCATCAAGGATTTGATTGTCGTGAGCAATAATT GCGGCGTTGATGATTTTGGGCTTGGCATTCTGTTAGAAAAAAAGCAGATTAAAAAGATTATCGCTTCCTATGTAGGGGAG AATAAGATTTTTGAATCGCAAATGCTGAACGGAGAAATTGAAGTCGTTTTGACACCGCAAGGCACGCTGGCTGAAAACTT GCGCGCTGGTGGGGCTGGGATACCCGCTTACTACACCCCAACCGGGGTTGGCACATTGATCGCTCAAGGCAAGGAATCAA GGGAGTTTAACGGCAAGGAGTATATTTTAGAAAGAGCGATCACAGGCGATTACGGGCTTATCAAGGCCTATAAAAGCGAC ACTCTTGGGAACTTGGTGTTTAGAAAAACGGCCAGAAACTTCAATCCCTTGTGCGCGATGGCGGCAAAAATATGCGTCGC TGAAGTGGAAGAAATTGTCCCGGCTGGGGAATTAGATCCAGATGAAATACACTTGCCAGGAATCTATGTGCAACACATCT ATAAGGGCGAGAAATTTGAAAAACGGATAGAAAAAATCACAACAAGGAGCACGAAATGA Protein sequence : MNKVITDLDKALSGLKDGDTILVGGFGLCGIPEYAIDYIYKKGIKDLIVVSNNCGVDDFGLGILLEKKQIKKIIASYVGE NKIFESQMLNGEIEVVLTPQGTLAENLRAGGAGIPAYYTPTGVGTLIAQGKESREFNGKEYILERAITGDYGLIKAYKSD TLGNLVFRKTARNFNPLCAMAAKICVAEVEEIVPAGELDPDEIHLPGIYVQHIYKGEKFEKRIEKITTRSTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18070.1 | unknown | Not tested | TTSS locus | Protein | 7e-27 | 44 |
