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Name : HPKB_0589 (HPKB_0589) Accession : YP_005762103.1 Strain : Helicobacter pylori 52 Genome accession: NC_017354 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 607544 - 608857 bp Length : 1314 bp Strand : - Note : Consensus COG by CONSORF: COG2056 DNA sequence : ATGCTAGAAAATAGCTCTATATGGAGCAATCCTGCCTTTGTGGCTATCATTTGCATGTGCGTTCTTAGCCTTTTAAGGCT CAATGTCATGCTTTCTATGATTAGCGCAACTCTCATAGCAGGACTTATGGGAGGGCTTGGATTGACAGAGAGTTTTAATG CAATGATAGATGGCATGAAAGGTAATTTAAACATCGCTTTAAGCTACATCCTTTTAGGGGCTTTAGCGGTAGCGATCGCT AAAAGCAATCTCATTAAAGTCGCTTTGAGTAAATTAATAGGCTTAATGAACTACAAGCGATCCACTTTTTGCTTTTTGAT CGCTTTCATCGCATGTTTTTCGCAAAATTTAGTGCCGGTGCATATCGCTTTTATCCCTATTTTAATCCCCCCTCTTTTGC ATTTAATGAACCGGCTAGAATTGGATAGAAGAGCGGTCGCTTGCGCTTTAACCTTTGGCTTGCAAGCCCCCTATTTGGTG CTTCCTGTAGGGTTTGGCTTGATTTTTCAAACCACCATTTTAGAGCAATTAAAAGCTAATGGCGTTAGCGCTACCCTAGC GCAAATCACAGGAGTGATGTGGATAGCGGGGTTAGCGATGGTTGTTGGGCTATTTGCCGCTGTATTAACGCTATACAAAA AACCCAGGCACTACAAAGAAAAATCTTTTAACATAGAAAATTACGACTCGCTTAAATTAAACTACCATGACTACTTGACT TTTATAGGGATTATCGTGGCGTTTGCGATCCAATTAACCACCGATTCGATGCCCCTAGCCGCCTTTTTAGCGTTAACGAT CATCTTACTAGGCCGTGGCATTAAGTTTAAAGAAACAGATTCGCTTATGGATGATAGCGTGAAAATGATGGCGTTTATCG CTTTTGTGATGTTAGTGGCTAGCGGGTTTGGAGAAGTGTTGCAAAAAGTGCATGCGATAGAGGGCTTAGTGAATGCGATC ACAAGCGTAGTCCAAGGGAAGTTTTTAGGGGCTTTTTTAATGCTTGTTGTGGGGCTTTTTATCACTATGGGGATAGGGAC TTCTTTTGGCACTATTCCTATCATCGCTGTGTTTTATGTCCCTTTATGCGCGAAATTAGGTTTTAGCATAGAATCTACGA TTTTACTCATCGGCATAGCCGCAGCTTTAGGCGATGCAGGCTCACCGGCTAGCGATAGCACCATGGGGCCTACTTGCGGG CTTAACGCAGACAACCAACACAATCATATCTATGACACATGCGTGCCGACTTTTTTAGTCTATAACCTCCCTTTGGTTGT TTTTGGAGTGGTTGGAGCGTTACTATTAGGCTAA Protein sequence : MLENSSIWSNPAFVAIICMCVLSLLRLNVMLSMISATLIAGLMGGLGLTESFNAMIDGMKGNLNIALSYILLGALAVAIA KSNLIKVALSKLIGLMNYKRSTFCFLIAFIACFSQNLVPVHIAFIPILIPPLLHLMNRLELDRRAVACALTFGLQAPYLV LPVGFGLIFQTTILEQLKANGVSATLAQITGVMWIAGLAMVVGLFAAVLTLYKKPRHYKEKSFNIENYDSLKLNYHDYLT FIGIIVAFAIQLTTDSMPLAAFLALTIILLGRGIKFKETDSLMDDSVKMMAFIAFVMLVASGFGEVLQKVHAIEGLVNAI TSVVQGKFLGAFLMLVVGLFITMGIGTSFGTIPIIAVFYVPLCAKLGFSIESTILLIGIAAALGDAGSPASDSTMGPTCG LNADNQHNHIYDTCVPTFLVYNLPLVVFGVVGALLLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cpfrc_01481 | YP_003783881.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 2e-56 | 41 |
| CpC231_1474 | YP_005683838.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 2e-56 | 41 |
| CpI19_1481 | YP_005685924.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 2e-56 | 41 |
| Cp1002_1472 | YP_005681739.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 2e-56 | 41 |
