Gene Information

Name : HPKB_0237 (HPKB_0237)
Accession : YP_005761766.1
Strain : Helicobacter pylori 52
Genome accession: NC_017354
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 242436 - 243593 bp
Length : 1158 bp
Strand : +
Note : Consensus COG by CONSORF: COG0659. Candidate starts by CONSORF: 242382,242388,242421,242436

DNA sequence : 
ATGTTGGAAAAGATACAAAAAGAATGGCTGAGCAACATTCAAAAAGATTTGTTGTCTGGTTTTGTGGTGGGGCTTTCTGT
GATCCCAGAGACGGCCGGTTTTGCGATCATGGTGGGTTTAGATGTGGGCGTGGCGTTTTATACGACCTTTTACATGGCTT
TTGTTTTGTCTCTTTTTGGGGCTAGAAAGGCGATGATTAGCGCAGCGGCCGGCTCAGTGGCACTCATTTTAGTGGGCGTG
GTTAAAAAGTATGGGCTTGAATACGCGGGCGTGGCGACTCTTATGGCAGGGGTGTTGCAAATTCTTTTAGGCTATTTGAA
AATAGGGAATCTTTTGAGGTTTATCCCCCAATCAGTGATGTATGGTTTTGTGAACGCGCTAGGCATTTTGCTGTTAATGG
AGCAATTCAAATTCCTTCAAAACCAAAATTTAGGGGTGTTTATCTTGCTTTTTATCGGAATATTGATCATTTACCTCTTC
CCCTTAATCACTAAAAAAATCCCCTCTAATCTGATTTGTATCCTTATAGTGAGCGCGATCGCTTTAATTTTTGATACGCA
TGCGCCGAATTTAGGGAGCATTGAGCAAGGGGTTTCAGGCTTTCATTGCATCATTATCCCCAAAAATTTGGATTTTAAAA
TTTTGATAGGATTGTTGCCTTACGCTCTTTCTTTAGCGCTAGTAGGCACGATAGAAAGTTTATTGACCGCTAAAACTTTA
GATGTGATTTTAAAAGACGGCGTGAGCGATAAAAATAAAGAAACTAAAGCGCAAGGCTTGGGGAATATCATCTCAGGGCT
TTTGGGGGGAATGACAGGGTGCGCTTTGGTGGGGCAGTCTATCATTAACGCAAAATCCGGAGCTAAAACTAGGCTTTCTA
CTTTTTTTGCCGGCTTTTCTTTAATGGTGCTAGTGCTAGTGTTTAATGAATACGTGGTTAAGATCCCTATTGTAGCGGTT
GTGGCGGTGATGGTGATGATTTCTTTCACCACTTTTAATTTCCAATCCATTACTAACATTAAAAAAATCAAGCCCTATGA
CACGCTGAATATGCTCTTAGTCGTGGCGGTGGTTTTATACACGCATAATTTAGCGATAGGGGTTGTGGTGGGGGTTTTAG
TCAATGCGTTATGGATCAAATCAAAAGGGATTGCATGA

Protein sequence : 
MLEKIQKEWLSNIQKDLLSGFVVGLSVIPETAGFAIMVGLDVGVAFYTTFYMAFVLSLFGARKAMISAAAGSVALILVGV
VKKYGLEYAGVATLMAGVLQILLGYLKIGNLLRFIPQSVMYGFVNALGILLLMEQFKFLQNQNLGVFILLFIGILIIYLF
PLITKKIPSNLICILIVSAIALIFDTHAPNLGSIEQGVSGFHCIIIPKNLDFKILIGLLPYALSLALVGTIESLLTAKTL
DVILKDGVSDKNKETKAQGLGNIISGLLGGMTGCALVGQSIINAKSGAKTRLSTFFAGFSLMVLVLVFNEYVVKIPIVAV
VAVMVMISFTTFNFQSITNIKKIKPYDTLNMLLVVAVVLYTHNLAIGVVVGVLVNALWIKSKGIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sulI CAJ77098.1 sulfate permease Not tested AbaR1 Protein 3e-47 46
sup AGK36657.1 sulphate permease Not tested AbaR26 Protein 3e-47 46
ACICU_00239 YP_001844898.1 MFS superfamily sulfate permease Not tested AbaR20 Protein 4e-47 46
sup ACN81033.1 sulphate permease Not tested AbaR5 Protein 4e-47 46
BJAB07104_00275 YP_008207740.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 2e-52 45
BJAB0868_00263 YP_008211589.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 2e-52 45
sup AFH57200.1 sulfate permease Not tested AbaR4a Protein 2e-52 45
BJAB0868_00279 YP_008211605.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 2e-52 45
sup AFV47947.1 sulphate premease Sup Not tested AbaR25 Protein 2e-52 45
ABZJ_00239 YP_005524195.1 sul1delta fusion protein Not tested AbaR22 Protein 2e-52 45
sup AFV47978.1 sulphate premease Sup Not tested delta-AbaR25 Protein 2e-52 45
ABZJ_00258 YP_005524214.1 sul1delta fusion protein Not tested AbaR22 Protein 2e-52 45
ABTW07_3910 YP_005797158.1 sul1delta fusion protein Not tested AbaR4e Protein 2e-52 45
sup AEQ20903.1 sulphate permease Not tested Tn6166 Protein 2e-52 45
ABK1_0240 YP_005512812.1 Sul1delta fusion protein Not tested AbaR4d Protein 2e-52 45
sup AEZ06030.1 sulphate permease Not tested Tn6167 Protein 2e-52 45
BJAB07104_00259 YP_008207724.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 2e-52 45
unnamed AEO37462.1 Sup* Not tested AbaR4 Protein 2e-48 45
ABTW07_3869 YP_005797117.1 sulfate permease Not tested AbaR4e Protein 5e-48 45