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Name : HPKB_1409 (HPKB_1409) Accession : YP_005762862.1 Strain : Helicobacter pylori 52 Genome accession: NC_017354 Putative virulence/resistance : Unknown Product : glutamate permease Function : - COG functional category : - COG ID : - EC number : - Position : 1457564 - 1458790 bp Length : 1227 bp Strand : - Note : Consensus COG by CONSORF: COG0786. Candidate starts by CONSORF: 1458811,1458790 DNA sequence : TTGCAAGAAATTAAATTAGACATTTATGCCACTTTAGTGTGCATGGTTTTGGTGTTACTTTTGGGGCGTTATGTGATTTC TAAAGTCAAATTTTTAAGAGATTATGATATTCCAGAGCCTGTTGTGGGTGGGGTTTTAGTCGCTTTTTTTATCATGTTAG CGCGTCAGTTTTACAATTTTGGTTTGCAATTTGATTCTTCTTTAAAAGATCCTTTAATGCTGACTTTTTTTATCACCATT GGTTTGAGCGCGGATTTCAAATCTTTGCAAAAAGGCGGGAAAATGCTTGCGGTTTTTTTGCTGGCTGTGGCGGGGTTTGT GGTGTGTCAAAATGCAGTGGGGGTTTCTATCGCTAGCCTTTTAGGGGTCAATCCTTTAATGGGGCTTTTAGGGGGGTCTA TCGCTTTAGTGGGAGGGCATGGCACTAGCGCGGCATGGGCTAATTTTTTCACCCAACCGCCTTATAATTTTAGCTCCAGC TTAGAAGTGGGCATGGCGTGCGCAACTTTTGGCTTGGTGAGTGGGGGGATTATCGGGGGACCTGTCGCTAAATATTTGAT CTCAAAATACAAACTAGAACCTAAAGACACTAAAGAAAAAGATACTTTAGAGGGCGTGGTGTCTAAAGGCTTTGAAACCC CTAAAGAGCAGCGCCTAATCACCGCATCCAGTTTTGTAGAAACTTTAGCTTTAATTGCGATCGCTTTATTGGTGGGGACT TTTTTATCGCATTTGATGCCTAAAAGCTTCACTTTGCCGACTTTTGTGTGGTGCTTGTTTGTAGGGGTTATTTTAAGAAA TGCTTTGTCGTTTTTTAAAATCCATAGCGTGTTTGACAGAGAGGTTTCAGTCATAGGGAATGTGAGTTTGAGTCTGTTTT TAGCCTACGCTTTAATGAGCGTGAATTTATTGGAATTGTTAAAACTCGCTGTGCCTCTAGCGGTTATTTTGAGCGTTCAA GTGGCGGTTATGATCCTTTATGTGGTGCTTGTAACCTTTAGGGTATGCGGGAAGGATTACGATGCAGCGGTGTTGTGCGC GGGGCATTGCGGTTTTGGGCTTGGAGCGACCCCAACGGCTATGGTGAATATGCAAACCATCACCAATCACTATGGGCCAT CGCATGTAGCGTTTATCGTCGTGCCTTTAGTGGGAGCGTTTTTTGTTGATATTATTAACGCTTTAGCGATTAAAGGCTTT TTGCTTTTGCCTTTTTTCCCGTCATGA Protein sequence : MQEIKLDIYATLVCMVLVLLLGRYVISKVKFLRDYDIPEPVVGGVLVAFFIMLARQFYNFGLQFDSSLKDPLMLTFFITI GLSADFKSLQKGGKMLAVFLLAVAGFVVCQNAVGVSIASLLGVNPLMGLLGGSIALVGGHGTSAAWANFFTQPPYNFSSS LEVGMACATFGLVSGGIIGGPVAKYLISKYKLEPKDTKEKDTLEGVVSKGFETPKEQRLITASSFVETLALIAIALLVGT FLSHLMPKSFTLPTFVWCLFVGVILRNALSFFKIHSVFDREVSVIGNVSLSLFLAYALMSVNLLELLKLAVPLAVILSVQ VAVMILYVVLVTFRVCGKDYDAAVLCAGHCGFGLGATPTAMVNMQTITNHYGPSHVAFIVVPLVGAFFVDIINALAIKGF LLLPFFPS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gltS | NP_273147.1 | sodium/glutamate symport carrier protein | Not tested | IHT-A | Protein | 2e-79 | 50 |
| unnamed | AEA34672.1 | sodium/glutamate symport carrier protein | Not tested | Not named | Protein | 2e-74 | 48 |
