|
Name : HPKB_0120 (HPKB_0120) Accession : YP_005761657.1 Strain : Helicobacter pylori 52 Genome accession: NC_017354 Putative virulence/resistance : Unknown Product : cysteine synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 121493 - 122413 bp Length : 921 bp Strand : - Note : Consensus COG by CONSORF: COG0031 DNA sequence : ATGATGATTATCACCACAATGCAAGACGCCATAGGCCGCACTCCCGTTTTTAAATTCACTAGCAAGGATTACCCCATTCC CATAAAGTCCGCCATTTACGCCAAACTAGAGCATTTAAACCCGGGAGGGAGCATCAAAGATCGCTTAGGCCAATACCTTA TAGAAGAAGGGTTTAAAACAGGCAAAATCACTTCTAAAACAACCATCATTGAGCCTACTGCAGGCAATACCGGCATCGCT CTAGCCTTAGTGGCACTCAAGCACCACTTAAAAACCATCTTTGTTGTCCCGGAAAAATTCAGCACAGAAAAACAACAAAT CATGAGGGCTTTGGGGGCTAAAGTGATCAACACGCCTACTAGCGAGGGGATTTCTGGTGCCATTAAAAAAAGTAAAGAGT TAGCCGAAAGTATCCCTGATAGCTATTTGCCCTTGCAATTTGAAAACCCTGATAATCCCGCCGCTTACTACCACACCCTA GCCCCTGAGATTGTCCAAGAATTAGGCACAAATCTTACGAGTTTTGTAGCCGGGATAGGGAGTGGTGGCACATTTGTTGG CACAGCTAGGTATTTGAAAGAACACATCCCTGCGATTCGCTTGATTGGGGTGGAGCCGGAGGGTTCTATTTTGAATGGGG GAGAGCCTGGGCCTCATGAGATTGAGGGCATTGGCGTGGAGTTTATCCCTCCTTTTTTTGCAAACTTAGATATTGATGGC TTTGAAACGATCTCAGATGAAGAGGGTTTTAGCTACACTAGGGAGTTAGCCAAGAAAAACGGCTTATTAGTGGGGAGCTC TAGCGGGGCGGCTTTTGTAGCAGCATTGAAAGAAGCGCAACGCCTCCCAGAAGGTAGCCAGGTTTTAACTATTTTCCCGG ATGTTGCCGATCGTTATCTCTCAAAAGGTATTTATTTATAA Protein sequence : MMIITTMQDAIGRTPVFKFTSKDYPIPIKSAIYAKLEHLNPGGSIKDRLGQYLIEEGFKTGKITSKTTIIEPTAGNTGIA LALVALKHHLKTIFVVPEKFSTEKQQIMRALGAKVINTPTSEGISGAIKKSKELAESIPDSYLPLQFENPDNPAAYYHTL APEIVQELGTNLTSFVAGIGSGGTFVGTARYLKEHIPAIRLIGVEPEGSILNGGEPGPHEIEGIGVEFIPPFFANLDIDG FETISDEEGFSYTRELAKKNGLLVGSSSGAAFVAALKEAQRLPEGSQVLTIFPDVADRYLSKGIYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAS0417 | YP_042544.1 | pyridoxal-phosphate dependent protein | Not tested | vSa¥á | Protein | 5e-38 | 51 |
| SAR0459 | YP_039908.1 | pyridoxal-phosphate dependent protein | Not tested | vSa¥á | Protein | 1e-38 | 51 |
