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Name : HPKB_0119 (HPKB_0119) Accession : YP_005761656.1 Strain : Helicobacter pylori 52 Genome accession: NC_017354 Putative virulence/resistance : Resistance Product : cystathionine gamma-synthase Function : - COG functional category : - COG ID : - EC number : - Position : 120330 - 121472 bp Length : 1143 bp Strand : - Note : Consensus COG by CONSORF: COG0626 DNA sequence : ATGCGCATGCAAACCAAATTAATCCATGGAGGCATTAGCGAGGACGCAACAACGGGGGCAGTGAGCGTGCCTATTTATCA AACTTCCACCTACCGCCAAGACGCCATAGGCCGCCACAAGGGCTATGAATACTCTCGCTCAGGCAACCCCACGCGCTTTG CTTTAGAAGAGCTCATCGCCGATTTAGAAGGGGGGGTTAAGGGGTTTGCTTTTGCCTCTGGTTTAGCTGGGATTCACGCC GTTTTTTCCCTCTTGCAATCAGGCGATCATGTGCTATTAGGCGATGATGTCTATGGGGGGACTTTTCGCTTGTTCAATAA AGTGCTTGTCAAAAACAACCTTTCTTGCACCATTATAGACACTAGCGATATATCCCAAATTAAAAAGGCTATCAAGCCCA ACACCAAAGCCCTTTATTTAGAAACCCCTAGTAACCCCTTGCTTAAAATCACGGATTTAGTGCAATGCGCTAGTGTTGCT AAAGATCATGGTTTGCTCACTATTGTGGATAACACCTTTGCCACCCCCTATTGCCAAAACCCGCTTCTTTTGGGAGCGGA TATTGTAGTGCATAGCGGCACCAAATACTTGGGCGGTCATAGCGATGTGGTCGCTGGGCTTGTAACCACTAATAATGAAG CGCTAGCCCAAGAGATCGCTTTTTTCCAAAACGCTATCGGTGGGGTTTTAGGCCCTCAAGACAGCTGGCTGTTGCAAAGA GGGATTAAAACGCTAGGATTGCGCATGGAGGCCCACCAAAAAAATGCCCTTTGCGTGGCTGAGTTTTTAGAAAAACACCC TAAAGTGGAGAAGGTTTATTACCCAGGTCTTCCCACTCACCCTAACCACGAACTGGCCAAAAAACAGATGCGTGGCTTTA GCGGGATGCTCTCTTTCACTCTCAAAAATGACAGCGAGGCGGTTGCTTTTGTGGAAAGCCTTAAATTATTCATTTTAGGC GAGAGTTTGGGCGGGGTGGAAAGTTTGGTGGGAATTCCTGCACTCATGACCCATGCGTGTATCCCTAAAGTGCAACGAGA AGCTGCCGGGATTAGAGATGGCCTGGTGCGCTTGTCTGTGGGGATTGAGCATGAACAGGATTTGTTAGAAGATTTAGAGC AAGCGTTCGCTAAAATAGGCTAA Protein sequence : MRMQTKLIHGGISEDATTGAVSVPIYQTSTYRQDAIGRHKGYEYSRSGNPTRFALEELIADLEGGVKGFAFASGLAGIHA VFSLLQSGDHVLLGDDVYGGTFRLFNKVLVKNNLSCTIIDTSDISQIKKAIKPNTKALYLETPSNPLLKITDLVQCASVA KDHGLLTIVDNTFATPYCQNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQR GIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKNDSEAVAFVESLKLFILG ESLGGVESLVGIPALMTHACIPKVQREAAGIRDGLVRLSVGIEHEQDLLEDLEQAFAKIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAR0460 | YP_039909.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 6e-97 | 55 |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 3e-98 | 55 |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 2e-73 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPKB_0119 | YP_005761656.1 | cystathionine gamma-synthase | BAC0207 | Protein | 2e-61 | 43 |
