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Name : HPKB_1111 (HPKB_1111) Accession : YP_005762586.1 Strain : Helicobacter pylori 52 Genome accession: NC_017354 Putative virulence/resistance : Unknown Product : pyrimidine nucleoside transport protein (nupC) Function : - COG functional category : - COG ID : - EC number : - Position : 1177315 - 1178571 bp Length : 1257 bp Strand : - Note : Consensus COG by CONSORF: COG1972. Candidate starts by CONSORF: 1178607,1178577,1178571 DNA sequence : ATGATTTTTAGCTCTCTTTTTAGTGTTGTAGGGATGGCGGTGCTTTTTCTTATTGCTTGGGTGTTTTCTGGCAATAAAAG GGCTATTAATTATCGCACGATTATTAGCGCGTTTGTGATTCAGGTGGCTTTAGGGGCGTTGGCTTTATATGTGCCTTTGG GTAGGGAAATGCTGCAAGGTTTAGCCAGTGGCATACAAAGCGTGATCGGTTACGGCTATGAGGGGGTGCGTTTTTTATTT GGCAATCTCGCTCCAAACGCTAAGGGCGATCAAGGGATAGGAGGCTTTATCTTTGCGATCAATGTTTTAGCGATCATTAT CTTTTTTGCTAGCTTGATTTCACTTCTATACTATTTAAAAATCATGCCTTTAGTGATCAATCTCATTGGTGGGGCGTTGC AAAGATGCTTAGGCACTTCTAAAGCAGAAAGCATGAGCGCAGCGGCTAATATTTTTGTAGCGCACACAGAAGCGCCCTTA GTCATTAAACCTTATTTGAAAAGCATGAGCGATTCAGAGATCTTTGCGGTCATGTGCGTGGGCATGGCTAGCGTTGCAGG ACCTGTGTTAGCCGGGTATGCGAGCATGGGCATTCCTTTGCCTTATTTAATAGCCGCTTCGTTTATGTCCGCTCCTGGGG GTTTGTTGTTCGCTAAAATCATTTACCCGCAAAACGAAACCATTTCTAGCCATGCAGATGTTTCTGTAGAAAAGCATGTC AATGCCATAGAAGCTATCGCTAATGGGGCAAGCACAGGGCTAAATTTAGCTTTGCATGTGGGAGCGATGCTTTTAGCCTT TGTGGGAATGCTTGCGCTCATTAACGGGCTTTTAGGGGTTGTAGGGGGGTTTTTAGGCATGGAGCATTTGTCTTTAGGGT TGATTTTAGGCACGCTCTTAAAACCCTTAGCCTTTATGCTAGGCATTCCGTGGAGTCAGGCCGGGATTGCTGGAGAAATC ATAGGCATTAAAATCGCGCTCAATGAATTTGTGGGCTATATGCAATTTTTACCTTATTTGGGCGATAACCCTCCTCTAAT CTTGAGCGAGAAAACTAAAGCGATCATCACTTTTGCGTTGTGCGGGTTTGCTAATTTAAGCTCAGTCGCTATGCTCATTG GAGGGCTTGGCAGTTTAGTGCCTAAAAAGAAAGATCTCATTGTAAGGCTTGCTTTAAAAGCGGTGCTTGTAGGCACGCTT TCTAACTTCATGAGCGCGACTATCGCTGGGTTATTCATAGGGCTAAACGCTCATTAA Protein sequence : MIFSSLFSVVGMAVLFLIAWVFSGNKRAINYRTIISAFVIQVALGALALYVPLGREMLQGLASGIQSVIGYGYEGVRFLF GNLAPNAKGDQGIGGFIFAINVLAIIIFFASLISLLYYLKIMPLVINLIGGALQRCLGTSKAESMSAAANIFVAHTEAPL VIKPYLKSMSDSEIFAVMCVGMASVAGPVLAGYASMGIPLPYLIAASFMSAPGGLLFAKIIYPQNETISSHADVSVEKHV NAIEAIANGASTGLNLALHVGAMLLAFVGMLALINGLLGVVGGFLGMEHLSLGLILGTLLKPLAFMLGIPWSQAGIAGEI IGIKIALNEFVGYMQFLPYLGDNPPLILSEKTKAIITFALCGFANLSSVAMLIGGLGSLVPKKKDLIVRLALKAVLVGTL SNFMSATIAGLFIGLNAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| yutK | YP_005163383.1 | putative sodium/nucleoside cotransporter | Not tested | Not named | Protein | 4e-49 | 41 |
