Gene Information

Name : SLUG_08860 (SLUG_08860)
Accession : YP_005760007.1
Strain : Staphylococcus lugdunensis N920143
Genome accession: NC_017353
Putative virulence/resistance : Unknown
Product : phage related amidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 927159 - 928568 bp
Length : 1410 bp
Strand : +
Note : -

DNA sequence :
ATGGTATCTGTTAGAACTTATAACCAAGCAATTGCGTATGTAAAAAAAATGGAAGGCAACGCATATGACCCTGATAGATC
TTATGGCGCGCAATGTTTTGATTTAGCCAATCAATACTGGCTTTATTTATTTGGCCATACTTTAAAGGGTGTAGGCGCTG
CAGATATACCAACATGGAACAACTTTACTAATGAAGCTACAGTGTATGAAAACACACAAACATTTCAAGCTAAACCGGGC
GATGTTGTTATTTTCAATCGAAATTATGGTGGCGGATACGGACACGTTGCAATTGTATTAAGCGCCACTTTAAACACAAT
AAATGTCATCGAGCAGAATTGGTTGGGAGGTGCTCAATGGTCCCCACCAGAAGTTGCTACACGTCGAGCACACGGTTATG
ACTTTCCTATGTATTTTATTAGACCATTCTATGCTAAAGAAACAACTAAGAATAAAGTTAAAAGTAAAGTAACTCCCGTT
AAAAAAGCTACTACCAAAAAAGGCAAAAAGATTTTATTAGTTGCCGGACATGGTAAAGGCGCATACTCTAACGACCCAGG
AGCAGTAGCAAATGGATATAACGAACGAGATTTCAACAGAAAAGAGATTATTCCTAGAATAAAAAAATATCTTGAGAGTG
TAGGAAATACAGTTGTGCTGTATGGCGGTAAGTCAATGAATCAAGACTTATACCAAGATACACTTTACGGCCAACGTGTT
GGCAACTACAGTGATTATGGCTTGTATTGGGTTAAAAACAATGTTAAACCTGACGCTATTATTGAATTTCATTTAGATGC
AGCGGGGCCTACTGCAAGTGGCGGACACGTTATTATTAGTGATAGATACCCTGCAGACGATATAGACAAAGCCTTATCAA
GTGCATTAGGTAAAACCGTTGGTAAAATTAGAGGTGTGACACCTAGAAACGATTTACTTAACGCTAACGTTACTGGTCAA
TTAAACTTAAACTACAGACTTATTGAACTCGGTTTCATTACTAGCGAAAAAGATATGAATTATATCACTAAGAATTTAGA
TAGTTTTACAAAACGAATTGCTGAAGCTATAAACGGTCGTCAAATTGAAGCTAAAGCAAGCAAACCGTCAAAAACCGTTA
AAACTAAGTGGGATTGGAAAGGTACGTTTTATCCTAATACAACGATTAAAGTTAGAAAATCTCCAGGCCTAAGTGGCACA
GTAGTTGAAAGTGGTTCATGGTTATACAATAAAAATGATTGGGTTAAATTCGACCAAGTCATCAAAAAAGACGGACATTG
GTTTATCAGATTTAAATACCAAGCGCCTGGATCTAGTGACAAACATTTCTATTGCGCAGTATGTAAAATCACTGATAAAG
AACAAAAAATTAAAAAAGAGAAATATTGGGGTCAAATTGATTGGACATAA

Protein sequence :
MVSVRTYNQAIAYVKKMEGNAYDPDRSYGAQCFDLANQYWLYLFGHTLKGVGAADIPTWNNFTNEATVYENTQTFQAKPG
DVVIFNRNYGGGYGHVAIVLSATLNTINVIEQNWLGGAQWSPPEVATRRAHGYDFPMYFIRPFYAKETTKNKVKSKVTPV
KKATTKKGKKILLVAGHGKGAYSNDPGAVANGYNERDFNRKEIIPRIKKYLESVGNTVVLYGGKSMNQDLYQDTLYGQRV
GNYSDYGLYWVKNNVKPDAIIEFHLDAAGPTASGGHVIISDRYPADDIDKALSSALGKTVGKIRGVTPRNDLLNANVTGQ
LNLNYRLIELGFITSEKDMNYITKNLDSFTKRIAEAINGRQIEAKASKPSKTVKTKWDWKGTFYPNTTIKVRKSPGLSGT
VVESGSWLYNKNDWVKFDQVIKKDGHWFIRFKYQAPGSSDKHFYCAVCKITDKEQKIKKEKYWGQIDWT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH1748 YP_253663.1 amidase Not tested ¥ÕSh1 Protein 7e-152 76
ytA NP_646197.1 truncated amidase Not tested ¥ÕSa2 Protein 1e-60 49
SAUSA300_1383 YP_494080.1 phiSLT ORF484-like protein, lysin Not tested ¥ÕSa2 Protein 2e-60 48
SAOV_0342 YP_005735859.1 prophage amidase, putative Not tested ¥ÕSa1 Protein 2e-59 47