Gene Information

Name : hlb (SLUG_00320)
Accession : YP_005759161.1
Strain : Staphylococcus lugdunensis N920143
Genome accession: NC_017353
Putative virulence/resistance : Virulence
Product : phospholipase C
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.4.3
Position : 37197 - 38186 bp
Length : 990 bp
Strand : +
Note : -

DNA sequence : 
ATGATGTATTTGGATTGGCAACGTAAATGTATCATAACTACGATGGTCGTATTGAGCAGTTTATTATTAGTATTTTCATC
AATTACATATGCTAGCGAACGCAATACTGAAGACAGCCTTAAAATTACAACACATAATGTTTATTTCTTGCCTACAGCAA
TATATCCTAATTGGGGGCAATCTCAGCGCGCTGATTTAATTTCAAAAGCGGATTATATCCAAGGTCAAGACGTTGTAATT
TTAAATGAATTATTTGATCACAAGGCATCAAATCGACTTTTAACAAATTTAAAATCACAATATCCTTATCAAACACCAAT
TGTTGGTCAAGGTACAGAAGGTTGGCAAAAGACATCTGGATCTTATAGAAAATTGAAAAAAGTGAGCGGTGGTGTTGGTA
TCGTGAGTAAATGGCCAATCGTACAACAAGAACAACATATTTACAAAAATGGTTGTGGCGCTGACAGTGTAGGCAATAAA
GGCTTTGCATACATTAAAATTAATAAAAACGGCAAATATCAACATATTATTGGAACGCACCTTCAAGCAGAAGATCCAGT
ATGTATGAAAGGGAAAGATCAAACGATTAGACAGAGTCAAATGGAAGAAATCAAACAATTTATCAAAGATAAAAATATTC
CAAAAGATGAACCCGTATATATTGGCGGTGATTTAAATGTCATTAAAGGTTCAGCGGAATATCAGAAAATGTCTGATAAC
TTGAATGTTTCAATGCCTAAACAATACGAGGGCAACGCGTATAGTTGGGATACACAAACTAACGGCATTGCGAATTATAA
TTATCCTAAATTAGAGCCGCAACATTTAGATTATATTTTACTAGATCGAGACCATGCACAACCAAGTTCATGGCATAATC
ATACACATAAAGTGAAATCACCAGAATGGTCTGTAAAATCTTGGGGTAAGACTTACCGATACAATGACTATTCAGACCAT
TATCCAGTTTCTGCATATGCAGCGAATTAA

Protein sequence : 
MMYLDWQRKCIITTMVVLSSLLLVFSSITYASERNTEDSLKITTHNVYFLPTAIYPNWGQSQRADLISKADYIQGQDVVI
LNELFDHKASNRLLTNLKSQYPYQTPIVGQGTEGWQKTSGSYRKLKKVSGGVGIVSKWPIVQQEQHIYKNGCGADSVGNK
GFAYIKINKNGKYQHIIGTHLQAEDPVCMKGKDQTIRQSQMEEIKQFIKDKNIPKDEPVYIGGDLNVIKGSAEYQKMSDN
LNVSMPKQYEGNAYSWDTQTNGIANYNYPKLEPQHLDYILLDRDHAQPSSWHNHTHKVKSPEWSVKSWGKTYRYNDYSDH
YPVSAYAAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlb NP_646757.1 truncated beta-hemplysin Not tested ¥ÕSa3 Protein 1e-69 55
unnamed CAA70683.2 sphingomyelinase-c Virulence LIPI-2 Protein 2e-78 55
hlb NP_375112.1 hypothetical protein Not tested ¥ÕSa3 Protein 1e-69 54
truncated-hlb NP_372527.1 hypothetical protein Not tested ¥ÕSa3 Protein 7e-70 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hlb YP_005759161.1 phospholipase C VFG0674 Protein 9e-79 55
hlb YP_005759161.1 phospholipase C VFG1798 Protein 3e-76 54