Gene Information

Name : SLUG_03220 (SLUG_03220)
Accession : YP_005759447.1
Strain : Staphylococcus lugdunensis N920143
Genome accession: NC_017353
Putative virulence/resistance : Virulence
Product : putative capsular polysaccharide synthesisenzyme
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 341466 - 342233 bp
Length : 768 bp
Strand : +
Note : -

DNA sequence : 
ATGATTGATATACATAATCATATTTTGATTAATGTGGACGATGGTCCTAAAACTAAAGAAGATGCCATTACTTTATTAAC
TCAAGCGAAGAATGAAGGGGTTACAGAGATTGTTGCGACACCACATCACTTAAGTCCCCAATATGATAACAGTTATAGTC
AGGTTAAAGAAAGTTTAGAACAACTCTTAGATATGGATGAAGTCAAAGATTTAGGTATCAAGCTTTATCCAGGACAAGAA
ATAAGAATAACAGATCAAATACTGTCCTTATTACAAAAAGGAGATGCCATTGGATTAAATAACTCTAACTATTTATTAAT
AGAGTTGCCGTCAAATAGTGTTCCACACTATACAAAACGTCTTTTCTTTGATTTACAGTCGAATGGTTATATCCCCATCA
TTGCCCATCCAGAGAGGAATAAGGTCATCACCCAAGACTTAGATGTTTTATATGAACTTATAAATTCGGGTGCGTTCAGC
CAGCTTACTTCAGCCTCGTTAATGGGAAAACTTGGAAAAAAAGTGCAAAAATTGTCCATTCAAATGATTGAAAATAATTT
ATCCCATTTCATAGCTTCAGATGCACACCATGTCACCCAAAGACCTTTTATCATGAATAGTTTGTTTAGCAATAAAAATT
TACAAAAATATGAAGAAAACATAAAAAATTTTATGAATAATGCAAAATCTGTCATCAAAAATGAAAATATAGTAAAAAAA
CAACCACTTCAAGAATATAAGCATAAAAAATTGTTTGGTTTATTTTAA

Protein sequence : 
MIDIHNHILINVDDGPKTKEDAITLLTQAKNEGVTEIVATPHHLSPQYDNSYSQVKESLEQLLDMDEVKDLGIKLYPGQE
IRITDQILSLLQKGDAIGLNNSNYLLIELPSNSVPHYTKRLFFDLQSNGYIPIIAHPERNKVITQDLDVLYELINSGAFS
QLTSASLMGKLGKKVQKLSIQMIENNLSHFIASDAHHVTQRPFIMNSLFSNKNLQKYEENIKNFMNNAKSVIKNENIVKK
QPLQEYKHKKLFGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1C AAA64642.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-73 56
SSP0062 YP_300152.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 9e-73 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLUG_03220 YP_005759447.1 putative capsular polysaccharide synthesisenzyme VFG1299 Protein 2e-74 57