Gene Information

Name : capA (SLUG_03200)
Accession : YP_005759445.1
Strain : Staphylococcus lugdunensis N920143
Genome accession: NC_017353
Putative virulence/resistance : Virulence
Product : capsular polysaccharide synthesis enzyme
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 340213 - 340758 bp
Length : 546 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGCCTAAATATGAGGCAAATACACAAGTGTTAGTAAACCAAAAAGAAAGCAATGAACAATACAGGGCTCAAGAAGT
TCAAAGTAATATTCAACTTGTTAATACGTATTCTGAAATTCTTAAGAGTCCACGTATATTAGAAGACGTAGCGAAAAAAG
ATAAAAATCTCTCTGCAAGTGAAATTGGCAACATGCTTACAGTCACAAAACAAGCTGACTCACAAATTTTAAATGTAAGT
GTTGAAAATCATAGCAAGGCAGACGCAGAACGCATAGCAAATGAAATTGTAAGTGTATTTAGTAAAGATATGCCGAAAAT
CATGGATATAGATAACGTTTCGATATTATCGAAAGCAGATGGAACTGCATCCAAAGTTTCACCTAATTTGTCGCAAAACT
TAGCAATAGGACTTGTATTAGGCTTAGTACTCACTATTGTAATTATCATTTTTAAAGAATTATTTGATAGAAGAATTAAA
ACAGAAGAAGATGTTATTAGAGAGTTGGACATTCCAGTTCTAGGTTCAATCCATAAATTGAAATAG

Protein sequence : 
MKPKYEANTQVLVNQKESNEQYRAQEVQSNIQLVNTYSEILKSPRILEDVAKKDKNLSASEIGNMLTVTKQADSQILNVS
VENHSKADAERIANEIVSVFSKDMPKIMDIDNVSILSKADGTASKVSPNLSQNLAIGLVLGLVLTIVIIIFKELFDRRIK
TEEDVIRELDIPVLGSIHKLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1A AAA64640.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-38 60
SSP0060 YP_300150.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 7e-37 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
capA YP_005759445.1 capsular polysaccharide synthesis enzyme VFG1297 Protein 1e-31 60