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Name : SLUG_23500 (SLUG_23500) Accession : YP_005761463.1 Strain : Staphylococcus lugdunensis N920143 Genome accession: NC_017353 Putative virulence/resistance : Resistance Product : ABC transporter family protein Function : - COG functional category : - COG ID : - EC number : - Position : 2502538 - 2504319 bp Length : 1782 bp Strand : - Note : - DNA sequence : ATGAAAAACCAACATTTAGACAAATTAAAAACACTCATGGGAAAGTATAAATATTTGTTTTATTTAGCGATTTTATTGTC TGTTGTTTCGAGTGTTATAAGTTTAGGCGCGTATTTGAATGTTTATTATGTTATTGAAAGTATGTTGTCAGCGAAAGGTA ATTTAAATAAATCAGTCATTGAGAAGATGACATATTTTGGATGGCAATCTGTTATTTATGTATCAGTCGCATTTATGTTT TATGGTTTAGCTTTACTACTATCTCATATAGTGGCATTTAACACTGTAGCTAAATATCGAATAACACTTATCGATTATAT GAACGAATTGCCGTTAGGATATTTTCAGAAAAGACAAAGTGGTAAATTACGTAAGCTTATTGAAAAGAATACTGAAGAAG TTGAACATTATATAGCACATCAGTTGCCTGATATGGCACAGGCATTAACGACACCAATCGCTTTTTTAGTATTGATTTTT ATATTTGATTGGAAGCTATCTCTTATTTGTTTAATTCCAGTTATTTTAGGTTTTCTTCTTTTGAAATTTATGATGGGAGA AGATAGCAAAGCGTTTTTAGAAAAATATCAAGAAGCATCAGCAAATATGGGTAATGATGTTGTTGAATACGTTCGTGGTA TATCAGTAGTAAAAATATTTGGGCAAACTGCTTTTTCATTTAAATCATTTAATCATGCTATCGAAAATTATAGGGATTTT ACCGTAAGTTATGCATTATCAATGAAGAAAGCGATGAGCGGTTATATCGTTTGTGTTTATGGTATTTTTTCTTTTCTTAT ACCGGCAACCATTATCTTCTTTAATCATTCAGAGCAGCTAAAATCCCTACTCTTAAGTTATATTTTCTTTGTAATTTTTA CACCACTAGTAGCATTTATGTTGATGAGAATTATGGAAAGTTCATATAAAGCTATGATTATTTTTCATGCAATGGATCAT CTTGACAAAAAAATATATAAAGCAAAAGCATTATCAATGCCAACGATTTCTATAAAACCTACGCGTTTTGATATTACTTT TAATAAGGTCAGTTTTACATATGAAGACATGAAACAAAAAGCAATTAATAAATTATCATTTACATGTCATCCTAATAGTG TCACTGCAATTGTAGGTCCTTCTGGAAGTGGAAAGTCAACAATATTTAATTTGATTACTCGATTTTATGATTTGGATGAA GGTTCTGTATTAGTAGGCGGTGTCGATGTAAAGAAAATGTCATATGAAGATTTAATGTCTAATATTAGTTTTGTGTTTCA AGAGACGAAACTATTTAAACTTAGTTTGTTAGAAAATATTCGTTTTTATAAACCAGATGCTACAAAGGCAGAGGTTGAGC GCGTGGTTGATCAAGCGCAATGTCGTGAAATTATTAATAAAATGCCTAACGGTTTAGATACCGTGTTTGGTACATCAGGT AGCTATTTATCAGGAGGAGAAATTCAGAGAATAACAATAGCTAGGGCAATGTTGAAAGATGCCCCTATCGTTCTATTAGA TGAAGCAACAGCCTTTAGTGATGCTGAGAATGAGTATAAAATCCAACAAGCACTTAATTCAATGATGAAAAATAAGACCG TTATCATGATAGCGCATCGATTGTCTACAGTGACGCATGCGGATCAAATTTTAGTCATTGACGAAGGAGAATTAGTTGAA GAAGGACAACATCGTTCATTAATGAAAGAAAATGGTGTTTATGCACGAATGTATAATAATTATCAGCAAAGTGTTAATTG GAGAATAGGGGTGGAAAGATGA Protein sequence : MKNQHLDKLKTLMGKYKYLFYLAILLSVVSSVISLGAYLNVYYVIESMLSAKGNLNKSVIEKMTYFGWQSVIYVSVAFMF YGLALLLSHIVAFNTVAKYRITLIDYMNELPLGYFQKRQSGKLRKLIEKNTEEVEHYIAHQLPDMAQALTTPIAFLVLIF IFDWKLSLICLIPVILGFLLLKFMMGEDSKAFLEKYQEASANMGNDVVEYVRGISVVKIFGQTAFSFKSFNHAIENYRDF TVSYALSMKKAMSGYIVCVYGIFSFLIPATIIFFNHSEQLKSLLLSYIFFVIFTPLVAFMLMRIMESSYKAMIIFHAMDH LDKKIYKAKALSMPTISIKPTRFDITFNKVSFTYEDMKQKAINKLSFTCHPNSVTAIVGPSGSGKSTIFNLITRFYDLDE GSVLVGGVDVKKMSYEDLMSNISFVFQETKLFKLSLLENIRFYKPDATKAEVERVVDQAQCREIINKMPNGLDTVFGTSG SYLSGGEIQRITIARAMLKDAPIVLLDEATAFSDAENEYKIQQALNSMMKNKTVIMIAHRLSTVTHADQILVIDEGELVE EGQHRSLMKENGVYARMYNNYQQSVNWRIGVER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1698 | YP_003446800.1 | multidrug ABC transporter ATPase/permease | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-106 | 43 |
