|
Name : SLUG_23300 (SLUG_23300) Accession : YP_005761443.1 Strain : Staphylococcus lugdunensis N920143 Genome accession: NC_017353 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : - COG ID : - EC number : - Position : 2470276 - 2471592 bp Length : 1317 bp Strand : - Note : high homology to ISSha3 of S. haemolyticus DNA sequence : ATGTATAAGTCTACATTAACCATGCTAAGAATTAAAGATAAAAATATTATTATTTCTGAAACTATTACAGAAGATAAATA TAAAGGTCATAAGAGCTTATTCTTTTACACAACTCTGACGTACAAGCCTTCTCATTGCGACAATTGCTTAGCTAAAAATG AAAATTATTCTATTATTAAAAACGGTAAAAAATTTTCAACGATTACTCTCCTTAGAATTATGGAAAGACCCGCTTATTTA AAGTTAAAAAAACAACGTTTTTATTGTAAAAACTGTGATAGTTACTTTACTGCTAAGTCAGAGATTGTGGACAATTACTG TTTTATTTCTAATACTACAAAACTTGCAGTTTTGGATAAAGCACAAGATTATCGTTCACAAAAATCTATCGCCAAATCCT GTTTAGTATCTTCAATGACTGTCACTCGAATTATTAATAAAGGGGCTAGTCAAGTTTACCATTCTTCATTTAATGCACTA CCCGAACACTTAATGATGGATGAGTTCAAGAGTGTTAAATATGTAACTGGAAAAATGAGTTTCATCTATGCAGATGCTAT TTCACACCGCATCGTAGATGCCGTTGCTGATCGCAAACTAAATTCATTAAAAAAACACTTCTATCGGTACTCATTGAAGT TAAGACAAAGTGTGAAAACTGTAACTATTGATATGTATACACCTTATATGTCTTTGATAAAGGAATTATTTCCAAAAGCT AAGATAATCTTAGATCGTTTTCATATTGTTCAATCCTTAAACAGAGCACTTAATATGTCGAGAGTAAGTATTATGAATCA GTTTAGAAACACTCATAGACCTCTTTATAATAAATACAAAGCCTTTTGGAAATTGTTCCTAAAACTTCGCGAATCACTCG AAATATTTAATTATAAAAAAGTGCGTTTATTTAAAGAATGGAAAACTGAGAAAGGAATTATAGACTATTTATTAACTTTT GATTCTCAATTATTTAATACATATCTCTATGTTCATGAATTGAGGAGACTATTAAAAGAAAACCGGGTTGAAAAGCTGAT TGACGTTTTATTTTCAATTAATCTTTCTGAAATTAGTATGAAACTTCGTCCTGTAATTAGGACATTAAGAAAATTAGCAC CTCTCATTGAAAATACTATCAATTATTCTAATTTGACCAACGGTCCAATTGAAGGAATCAATAATAAAATTAAGCTAATA AAAAGAGTTTCATTTGGTTATAGAAATTATGATAATTTACGAAATAGAATTATTATTAGTTCAAGATTATTCGCTCCAAT ACATAAAAAAGATATTAAGCAACTTGAAATTGCTTAA Protein sequence : MYKSTLTMLRIKDKNIIISETITEDKYKGHKSLFFYTTLTYKPSHCDNCLAKNENYSIIKNGKKFSTITLLRIMERPAYL KLKKQRFYCKNCDSYFTAKSEIVDNYCFISNTTKLAVLDKAQDYRSQKSIAKSCLVSSMTVTRIINKGASQVYHSSFNAL PEHLMMDEFKSVKYVTGKMSFIYADAISHRIVDAVADRKLNSLKKHFYRYSLKLRQSVKTVTIDMYTPYMSLIKELFPKA KIILDRFHIVQSLNRALNMSRVSIMNQFRNTHRPLYNKYKAFWKLFLKLRESLEIFNYKKVRLFKEWKTEKGIIDYLLTF DSQLFNTYLYVHELRRLLKENRVEKLIDVLFSINLSEISMKLRPVIRTLRKLAPLIENTINYSNLTNGPIEGINNKIKLI KRVSFGYRNYDNLRNRIIISSRLFAPIHKKDIKQLEIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp | YP_251995.1 | transposase for ISSha1 | Not tested | SCCmec | Protein | 1e-164 | 77 |
| tnp | YP_251945.1 | transposase for ISSha1 | Not tested | SCCmec | Protein | 1e-163 | 77 |
| SACOL1879 | YP_186706.1 | IS1181 transposase | Not tested | vSa¥â | Protein | 5e-79 | 45 |
| tnp | NP_371686.1 | IS1181 transposase | Not tested | vSa¥ã | Protein | 3e-79 | 45 |
| SA1006 | NP_374278.1 | IS1181 transposase | Not tested | vSa¥ã | Protein | 3e-79 | 45 |
