Gene Information

Name : vraF (SLUG_21370)
Accession : YP_005761252.1
Strain : Staphylococcus lugdunensis N920143
Genome accession: NC_017353
Putative virulence/resistance : Resistance
Product : putative ABC transporter protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2263227 - 2263988 bp
Length : 762 bp
Strand : -
Note : -

DNA sequence : 
GTGTCAATATTAGTAGTTAAAGAATTAACTAAAATATACGGAAGTAAAGATATGCAGCAGGAAGTTTTAAGAGGTATTAA
TCTTTCAGTTGATGAAGGTGAATTTGTCTCAATAATGGGACCTTCTGGCTCTGGAAAAACGACGTTATTAAATATTTTGG
GATCAATTGATTATATGTCACAAGGTTCAGTAGAATTAGCTGGACATAAACTAGAAAAAATGTCGAATAAAGCGCTATCT
GATATGCGTAAGCGGGATATTGGGTTTATTTTTCAAGATTATAATTTACTACATACATTGACGGTAAAAGAGAATATTTT
ATTGCCGTTATCTGTACAAAAAATTAGTAAAGAGATGGCAATGAAGCGTTATCATAAAGTTGTTGAAACATTAAATATTG
CAGAATTGGGTGATAAATACCCTTCAGAACTTTCTGGTGGTCAACGGCAGCGAACATCTGCCGCACGCGCTTTTATTACA
TTACCTAAAATTATTTTTGCAGATGAACCTACAGGCGCTTTAGACTCCAAAAGTTCTCAAGATTTATTGGAACGACTTGT
CTATATGAATAAATATCGACAAACGACAATTATCATGGTCACGCATGATCCATTAGCAGCAAGCTTTTCTAATCGTGTAG
TCATGTTGAAAGATGGACAAATATTTACTGAGCTCTATCAAGGGGATGATGACGATGAAACATTTTATCGTGAAATTATT
CGCACACAAAGTGTTTTAGGTGGGGTTCATCATGAATTTTAA

Protein sequence : 
MSILVVKELTKIYGSKDMQQEVLRGINLSVDEGEFVSIMGPSGSGKTTLLNILGSIDYMSQGSVELAGHKLEKMSNKALS
DMRKRDIGFIFQDYNLLHTLTVKENILLPLSVQKISKEMAMKRYHKVVETLNIAELGDKYPSELSGGQRQRTSAARAFIT
LPKIIFADEPTGALDSKSSQDLLERLVYMNKYRQTTIIMVTHDPLAASFSNRVVMLKDGQIFTELYQGDDDDETFYREII
RTQSVLGGVHHEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-36 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vraF YP_005761252.1 putative ABC transporter protein CP001581.1.gene598.p Protein 1e-36 43
vraF YP_005761252.1 putative ABC transporter protein NC_012469.1.7686878. Protein 1e-38 42
vraF YP_005761252.1 putative ABC transporter protein CP001581.1.gene798.p Protein 8e-34 41