Gene Information

Name : smpB (SLUG_20180)
Accession : YP_005761133.1
Strain : Staphylococcus lugdunensis N920143
Genome accession: NC_017353
Putative virulence/resistance : Unknown
Product : putative tmRNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2131064 - 2131528 bp
Length : 465 bp
Strand : -
Note : -

DNA sequence :
GTGGCTAAAAAGAAATCACCAGGGACATTAGCTGAAAATCGTAAAGCACGACACGACTACAACATTGAAGATACCATAGA
AGCAGGCATCGTCTTACAAGGAACCGAAATAAAATCGATACGTCGTGGCAGTGCTAACTTAAAAGATAGCTATGCCCAAG
TAAAACATGGAGAAATCTATTTAAACAATATGCACATCGCACCATATGAAGAAGGAAATCGCTTTAATCATGATCCATTA
CGCTCTAGAAAACTCTTATTACACAAACGAGAAATTATCAAACTAGGCGAGCGTACAAGAGAAGTAGGATACTCAATCAT
TCCGCTTAAACTGTATTTAAAACACGGTCATTGTAAAGTACTGCTTGGCGTAGCAAGAGGTAAGAAAAAATACGATAAGC
GTCAAGCGTTGAAAGAAAAAGCGATGAAACGCGATGTAGATCGTGCGATGAAAGCCCGTTATTAA

Protein sequence :
MAKKKSPGTLAENRKARHDYNIEDTIEAGIVLQGTEIKSIRRGSANLKDSYAQVKHGEIYLNNMHIAPYEEGNRFNHDPL
RSRKLLLHKREIIKLGERTREVGYSIIPLKLYLKHGHCKVLLGVARGKKKYDKRQALKEKAMKRDVDRAMKARY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 3e-62 94
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 1e-30 49
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 1e-25 45