Gene Information

Name : SLUG_15560 (SLUG_15560)
Accession : YP_005760669.1
Strain : Staphylococcus lugdunensis N920143
Genome accession: NC_017353
Putative virulence/resistance : Unknown
Product : putative transketolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1634369 - 1636357 bp
Length : 1989 bp
Strand : -
Note : -

DNA sequence :
ATGTTTAACGAAAAAGATCAATTAGCAATAGATACCATTCGTGCATTAAGCATTGATGCAATTGAACAGGCTAACTCTGG
GCATCCGGGTTTACCAATGGGAGCTGCACCAATGGCATATACTTTATGGACAAGACATTTGAATTTTAATCCACAGTCTA
AAGATTACTTTAATAGAGATAGATTCATTTTGTCTGCTGGACATGGATCTGCATTACTTTATAGTTTATTACACGTCTCA
GGAAGTCTTGAGCTTGAAGAGCTTAAACAGTTTAGACAATGGGACTCAAAAACACCAGGGCATCCAGAATATAGACATAC
TGATGGTGTAGAAGTAACAACAGGACCATTAGGACAAGGATTTGCAATGGGAGTAGGGATGGCATTAGCTGAAAGTCATC
TTGCAGGTAAATTTAATAAAGATAATTTTGATATTGTTAATCACTATACTTATGTATTAGCTTCAGATGGCGATTTAATG
GAAGGAATTTCTCATGAAGCGGCTTCATTTGCAGGCCATAATCAATTAGATAAACTCATTGTCTTATATGATTCAAATGA
TATTTCATTAGATGGAGAATTAGATAAAGCTTTTTCTGAAGATGTAAAAAAACGTTTTGAATCATATGGTTGGAATCATA
TTTTAGTTAAAGATGGTAACAATTTAAACCAAATAGACAAAGCGATTACTACTGCTAAGTCTCAGCAAGGTCCAACTTTA
ATTGAAATTAAAACAATTATTGGTTATGGTTCACCTAACAAAAAAGGCACAAACGGTGTCCATGGTGCACCTTTAGGCGC
AGAAGAAAGAAAACTAACATTTGAAAACTATGGTTTAGATCCAGATAAAAAATTCTATGTTCCTGAAGAAGTATATGAAA
TTTTCCAAACAACAATGTTAAAACGTGCTAATGAAAATGAAGAATCTTGGAATGATAAATTAGAAGCATATTCTCAACAA
TATCCGCAATTAGCAGAAGAATTTAAATTAGCTGTCAGCGGTAAGTTGCCATCAAATTATAAAGAAAAATTACCAAGATT
TGATTTGAATCATAATGGTGCTTCTCGTGCTGATTCTGGAGAAGTTATTCAAGCTTTAAGTCAATCTGTTCCATCTTTCT
TTGGTGGTTCTGCTGACTTAGCTGGTTCAAATAAATCAAACGTTAAAGAAGCTAAAGATTATGACAAAGATACACCAGAA
GGTAAAAATATATGGTTCGGTGTACGTGAATTTGCTATGGGCGCAGCAGTCAATGGTATGGCTGCACATGGAGGCTTGCA
TCCATATGGAGCGACATTCTTTGTATTTAGTGATTATCTAAAACCAGCATTCCGTTTATCTGCAATAATGGGTCTTAATT
CAACATTTATTTTCACGCATGATTCAATAGCTGTCGGAGAAGATGGTCCTACGCATGAACCAATTGAACAACTCGCTGGC
TTAAGAGCGATTCCCAATATGAATGTTATTCGCCCAGCTGATGGTAATGAAACACGTGTAGCTTGGGAAGTTGCACTTGA
ATCTGAACAAACGCCAACATCATTAGTATTAACTCGTCAAAACCTCCCTGTCCTTGATGTAACAGAAGCACAAGTAGAAG
AAGGCGTTCGTAAAGGTGCTTATACAGTATTTGAAACAGAAACAGCAGTTGAGTATTTATTATTAGCTTCAGGTTCTGAA
GTAAGTTTAGCTGTTGAAGCTGCGAAAGATCTTGAAAAGCAAGGTAAAGGTGTAAGAGTTGTATCAATGCCAAACTGGTT
TGCTTTTGAACAACAATCTGATGATTATAAAGAATCTGTCATTCCAAAACATATTACGAAACGTGTTGCGATTGAAATGG
CATCATCACTTGGTTGGCACAAGTATGTGGGTACTGATGGCAAAGTCATTGGTATAGACGAATTTGGGGCAAGTGCGCCA
GGTGGTCTAGTAGTTGAAAAATATGGTTTCACTAAAGAGAATGTATTAAATCAAATACAAACGCTTTAA

Protein sequence :
MFNEKDQLAIDTIRALSIDAIEQANSGHPGLPMGAAPMAYTLWTRHLNFNPQSKDYFNRDRFILSAGHGSALLYSLLHVS
GSLELEELKQFRQWDSKTPGHPEYRHTDGVEVTTGPLGQGFAMGVGMALAESHLAGKFNKDNFDIVNHYTYVLASDGDLM
EGISHEAASFAGHNQLDKLIVLYDSNDISLDGELDKAFSEDVKKRFESYGWNHILVKDGNNLNQIDKAITTAKSQQGPTL
IEIKTIIGYGSPNKKGTNGVHGAPLGAEERKLTFENYGLDPDKKFYVPEEVYEIFQTTMLKRANENEESWNDKLEAYSQQ
YPQLAEEFKLAVSGKLPSNYKEKLPRFDLNHNGASRADSGEVIQALSQSVPSFFGGSADLAGSNKSNVKEAKDYDKDTPE
GKNIWFGVREFAMGAAVNGMAAHGGLHPYGATFFVFSDYLKPAFRLSAIMGLNSTFIFTHDSIAVGEDGPTHEPIEQLAG
LRAIPNMNVIRPADGNETRVAWEVALESEQTPTSLVLTRQNLPVLDVTEAQVEEGVRKGAYTVFETETAVEYLLLASGSE
VSLAVEAAKDLEKQGKGVRVVSMPNWFAFEQQSDDYKESVIPKHITKRVAIEMASSLGWHKYVGTDGKVIGIDEFGASAP
GGLVVEKYGFTKENVLNQIQTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 8e-142 47
tktA AAO17218.1 TktA Not tested tcd island Protein 7e-132 47