Gene Information

Name : arlR (SLUG_15060)
Accession : YP_005760622.1
Strain : Staphylococcus lugdunensis N920143
Genome accession: NC_017353
Putative virulence/resistance : Virulence
Product : response regulator protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1582043 - 1582702 bp
Length : 660 bp
Strand : -
Note : -

DNA sequence : 
ATGGCAAATATTTTAATTGTCGAAGATGAACAAAATTTAGCTCGTTTTCTAGAGCTGGAATTAACGCATGAAAATTATAA
AGTGGACATAGAGAATGATGGGCAAAGTGGTTTAGATAAAGCGTTAACCAAAACATATGACTTGATTATATTAGATATAA
TGTTGCCTCATATTAATGGTTTAGAAATCTGTAGAAGAATTCGTCAGCAATACACGACACCCATAATTATTATTACAGCA
AAGAGTGAAACGATGGATAAAGTAACTGGCTTGGATTATGGGGCAGATGATTATATTGTAAAACCATTTGAAATTGAAGA
ATTATTTGCTCGAATACGAGCGATTTTACGCAGACAACCCCAGAAAGATGTTATCGATATTAATGGTATTATTATTGATA
AAAATGCTTTTGAAGTAACCGTGGACGGGACACAACTAGATTTAACTAAAACAGAATATGATCTTTTGTATGTTCTTGCA
GAAAATAGGAATCATGTCTTGCAACGCGAACAAATACTTGATCATGTATGGGGATATGATAGTGAAGTTGAAACGAATGT
TGTAGATGTTTACATCAGATATTTAAGAAATAAGTTAAAGCCTTTTAATAAAGAAAGAACGATTGAAACAGTCCGAGGCG
TAGGATATGTGATACGATGA

Protein sequence : 
MANILIVEDEQNLARFLELELTHENYKVDIENDGQSGLDKALTKTYDLIILDIMLPHINGLEICRRIRQQYTTPIIIITA
KSETMDKVTGLDYGADDYIVKPFEIEELFARIRAILRRQPQKDVIDINGIIIDKNAFEVTVDGTQLDLTKTEYDLLYVLA
ENRNHVLQREQILDHVWGYDSEVETNVVDVYIRYLRNKLKPFNKERTIETVRGVGYVIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-36 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-35 43
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 4e-32 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arlR YP_005760622.1 response regulator protein AE015929.1.gene1106. Protein 2e-84 87
arlR YP_005760622.1 response regulator protein NC_002951.3238224.p0 Protein 2e-86 83
arlR YP_005760622.1 response regulator protein NC_007793.3914065.p0 Protein 2e-86 83
arlR YP_005760622.1 response regulator protein NC_002758.1121390.p0 Protein 2e-86 83
arlR YP_005760622.1 response regulator protein NC_010079.5776364.p0 Protein 2e-86 83
arlR YP_005760622.1 response regulator protein NC_002952.2859858.p0 Protein 2e-86 83
arlR YP_005760622.1 response regulator protein NC_007622.3794948.p0 Protein 2e-86 83
arlR YP_005760622.1 response regulator protein NC_003923.1003417.p0 Protein 2e-86 83
arlR YP_005760622.1 response regulator protein NC_013450.8614146.p0 Protein 2e-86 83
arlR YP_005760622.1 response regulator protein HE999704.1.gene1528. Protein 2e-51 56
arlR YP_005760622.1 response regulator protein BAC0308 Protein 3e-36 43
arlR YP_005760622.1 response regulator protein NC_005054.2598277.p0 Protein 2e-33 42
arlR YP_005760622.1 response regulator protein NC_014475.1.orf0.gen Protein 2e-33 42
arlR YP_005760622.1 response regulator protein DQ212986.1.gene4.p01 Protein 8e-33 42
arlR YP_005760622.1 response regulator protein BAC0125 Protein 4e-38 42
arlR YP_005760622.1 response regulator protein AF155139.2.orf0.gene Protein 1e-33 42
arlR YP_005760622.1 response regulator protein FJ349556.1.orf0.gene Protein 6e-34 42
arlR YP_005760622.1 response regulator protein BAC0197 Protein 5e-36 42
arlR YP_005760622.1 response regulator protein NC_002952.2859905.p0 Protein 3e-36 41
arlR YP_005760622.1 response regulator protein NC_002745.1124361.p0 Protein 2e-36 41
arlR YP_005760622.1 response regulator protein NC_009782.5559369.p0 Protein 2e-36 41
arlR YP_005760622.1 response regulator protein NC_002951.3237708.p0 Protein 2e-36 41
arlR YP_005760622.1 response regulator protein NC_002758.1121668.p0 Protein 2e-36 41
arlR YP_005760622.1 response regulator protein NC_009641.5332272.p0 Protein 2e-36 41
arlR YP_005760622.1 response regulator protein NC_013450.8614421.p0 Protein 2e-36 41
arlR YP_005760622.1 response regulator protein NC_007622.3794472.p0 Protein 3e-36 41
arlR YP_005760622.1 response regulator protein NC_007793.3914279.p0 Protein 2e-36 41
arlR YP_005760622.1 response regulator protein AF253562.2.orf0.gene Protein 2e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arlR YP_005760622.1 response regulator protein VFG0596 Protein 2e-36 44
arlR YP_005760622.1 response regulator protein VFG1702 Protein 1e-31 42
arlR YP_005760622.1 response regulator protein VFG1563 Protein 2e-32 42
arlR YP_005760622.1 response regulator protein VFG1389 Protein 1e-37 42