Gene Information

Name : xerD (SLUG_14130)
Accession : YP_005760530.1
Strain : Staphylococcus lugdunensis N920143
Genome accession: NC_017353
Putative virulence/resistance : Unknown
Product : integrase/recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1481514 - 1482401 bp
Length : 888 bp
Strand : +
Note : -

DNA sequence :
ATGAATACAATCATAGAAGAATATTTAAAATTTATTCAAATTGAAAAGGGATTAAGTCCAAATACGATTGGTGCCTATCG
TAGAGATTTAGATAAATATAAACTTTATCTTGAAACACGACATATTGAACATATCGACTTTATAGACCGTCAAACGATAC
AAGAGTGTTTAGGTTACTTAATTGATCAAGGAAGTTCGGCTAAATCGTTAGCTCGTTTTATTTCAACTATTAGAAGTTTT
CATCAATTTGCATTACGAGAAAAGTATGCCGCAAAAGATCCAACTGTATTACTTGAAACACCGAAATACGAGAAAAAATT
ACCTGATGTTCTTGAAATAGATGAAGTTGTACGTTTATTAGAAGCGCCAGATTTATCTAAAAAAAATGGCTATAGAGATC
GCACAATTCTTGAATTAATGTATGCAACTGGTATGCGTGTTTCCGAACTCGTGCATATTGAAATAGAAAACATTAATGTC
ATTATGGGCTTTGTACGTGTGTTTGGTAAAGGTGATAAAGAACGCATTATTCCATTAGGTGATACTGTCATAGATTATTT
AAAGACTTATATGAAAGAGATTCGACCACAATTGCTTAAAAGCACGGTTACGAATGTATTGTTTTTAAATATGCATGGTA
AACCATTATCTCGACAAGGTATTTGGAAAATGATTAAACAATATGGCATAAAATCAAATATTACGAAAACATTAACGCCA
CATACTTTAAGACATTCATTTGCAACACATTTATTAGAAAACGGTGCTGATTTAAGAGCAGTTCAAGAAATGCTTGGACA
TTCAGACATATCAACTACGCAATTATATACTCATGTTTCTAAAGCACAAATCAGGCAAATATATAATCAATATCATCCAA
GGGCATAA

Protein sequence :
MNTIIEEYLKFIQIEKGLSPNTIGAYRRDLDKYKLYLETRHIEHIDFIDRQTIQECLGYLIDQGSSAKSLARFISTIRSF
HQFALREKYAAKDPTVLLETPKYEKKLPDVLEIDEVVRLLEAPDLSKKNGYRDRTILELMYATGMRVSELVHIEIENINV
IMGFVRVFGKGDKERIIPLGDTVIDYLKTYMKEIRPQLLKSTVTNVLFLNMHGKPLSRQGIWKMIKQYGIKSNITKTLTP
HTLRHSFATHLLENGADLRAVQEMLGHSDISTTQLYTHVSKAQIRQIYNQYHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-51 42
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-51 42